CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSDNOG00000002674
(
Dasypus novemcinctus
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
ENSDNOG00000002674
T10118_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDNOP00000002075
CCHC ZF
395
412
DSCFCCGQPGHWASQCPQ
Links
Other
CCHC ZF
family RBPs
Other
Dasypus novemcinctus
RBPs
21 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ENSCAFG00000001569
Canis familiaris
ENSCAFG00000001569
N
0.833
ENSSSCG00000005884
Sus scrofa
ENSSSCG00000005884
N
0.889
ENSSSCG00000005898
Sus scrofa
ENSSSCG00000005898
N
0.889
ENSTSYG00000012090
Tarsius syrichta
ENSTSYG00000012090
N
0.778
recql4
Xenopus tropicalis
ENSXETG00000016582
N
0.722
fgeneshEH_pg.19__19
Emiliania huxleyi
fgeneshEH_pg.19__19
N
0.722
GRMZM2G069218
Zea mays
GRMZM2G069218
N
0.722
AAI61707
Xenopus laevis
AAI61707
N
0.722
AAY89585
Xenopus laevis
AAY89585
N
0.722
ENSSARG00000013351
Sorex araneus
ENSSARG00000013351
N
0.778
Recql4
Rattus norvegicus
ENSRNOG00000032446
N
0.778
ENSPVAG00000006784
Pteropus vampyrus
ENSPVAG00000006784
N
0.889
Recql4
Dipodomys ordii
ENSDORG00000002297
N
0.778
ENSECAG00000018665
Equus caballus
ENSECAG00000018665
N
0.778
ENSLAFG00000009512
Loxodonta africana
ENSLAFG00000009512
N
0.778
ENSMEUG00000001818
Macropus eugenii
ENSMEUG00000001818
N
0.722
ENSMLUG00000011295
Myotis lucifugus
ENSMLUG00000011295
N
0.833
ENSMODG00000011014
Monodelphis domestica
ENSMODG00000011014
N
0.722
Recql4
Mus musculus
ENSMUSG00000033762
N
0.778
ENSOPRG00000002588
Ochotona princeps
ENSOPRG00000002588
N
0.889
BAE48358
Xenopus laevis
BAE48358
N
0.722