genemark.2333_g (Pleurotus ostreatus)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 genemark.2333_g T15708_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
genemark.2333_g CCHC ZF 121 138

Links

Other CCHC ZF family RBPs
Other Pleurotus ostreatus RBPs

5 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
BC1G_09648 Botrytis cinerea BC1G_09648 N 0.000
AO090003000544 Aspergillus oryzae CADAORAG00001164 N 0.000
NCU07069 Neurospora crassa NCU07069 N 0.000
e_gw1.18.2147.1 Nectria haematococca e_gw1.18.2147.1 N 0.000
e_gw1.5.1788.1 Thielavia terrestris e_gw1.5.1788.1 N 0.000
estExt_fgenesh1_pm.C_chr_20271 Mycosphaerella graminicola estExt_fgenesh1_pm.C_chr_20271 N 0.000
estExt_fgenesh2_kg.C_20245 Neurospora tetrasperma estExt_fgenesh2_kg.C_20245 N 0.000
estExt_fgenesh3_kg.C_60024 Neurospora discreta estExt_fgenesh3_kg.C_60024 N 0.000
estExt_fgenesh5_pg.C_160051 Trichoderma reesei estExt_fgenesh5_pg.C_160051 N 0.000
estExt_Genewise1.C_21744 Trichoderma virens estExt_Genewise1.C_21744 N 0.000
estExt_Genewise1Plus.C_51423 Myceliophthora thermophila estExt_Genewise1Plus.C_51423 N 0.000
estExt_Genewise1Plus.C_80545 Mycosphaerella fijiensis estExt_Genewise1Plus.C_80545 N 0.000
fgenesh2_kg.10__63__CBWT_CBYP_CBYT_CCAH_1370_0_CBYT4195.b1 Trichoderma atroviride fgenesh2_kg.10__63__CBWT_CBYP_CBYT_CCAH_1370_0_CBYT4195.b1 N 0.000
AB02127.1 Alternaria brassicicola AB02127.1 N 0.000
estExt_Genewise1.C_90037 Cryphonectria parasitica estExt_Genewise1.C_90037 N 0.000
fgenesh1_pm.00168_#_248 Aspergillus carbonarius fgenesh1_pm.00168_#_248 N 0.000
ANIA_04978 Aspergillus nidulans CADANIAG00005417 N 0.000
An16g03890 Aspergillus niger CADANGAG00012860 N 0.000
CHGG_09128 Chaetomium globosum CHGG_09128 N 0.000
CIMG_03560 Coccidioides immitis CIMG_03560 N 0.000
CPSG_02395 Coccidioides posadasii CPSG_02395 N 0.000
FOXG_05959 Fusarium oxysporum FOXG_05959 N 0.000
FVEG_03827 Fusarium verticillioides FVEG_03827 N 0.000
GLRG_08760 Colletotrichum graminicola GLRG_08760 N 0.000
HCAG_00086 Histoplasma capsulatum HCAG_00086 N 0.000
PTRG_11856 Pyrenophora tritici repentis PTRG_11856 N 0.000
SS1G_14437 Sclerotinia sclerotiorum SS1G_14437 N 0.000
TEQG_05050 Trichophyton equinum TEQG_05050 N 0.000
TESG_02526 Trichophyton tonsurans TESG_02526 N 0.000
VDAG_10099 Verticillium dahliae VDAG_10099 N 0.000
ACLA_037960 Aspergillus clavatus CADACLAG00003195 N 0.000
AFLA_032760 Aspergillus flavus CADAFLAG00002651 N 0.000
AFUA_3G10100 Aspergillus fumigatus CADAFUAG00005849 N 0.000
Pa_4_8210 Podospora anserina Pa_4_8210 N 0.000