CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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GK17751
(
Drosophila willistoni
)
CSD
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00313 (CSD)
IPR002059
FBgn0219750
T17105_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0246894
CSD
199
264
RETGIIEKLLHSYGFIQCCERQARLFFHFSQFSGNIDHLKIGDPVEFEMTYDRRTGKPIASQVSKI
FBpp0246894
CSD
286
350
DSANNVLSSSETTGRISYENRGECFFLPYTKDDVEGNVNLRAGDKVSFQIATNQRGNLGACHIRL
FBpp0246894
CSD
358
425
KYRGVVCSMKESFGFIERADVVKEIFFHFSEAEGNVELRPGDDVEFTIQTRSQSASVPPQGREFACNI
FBpp0246894
CSD
531
598
REQGTIASLKDGFGFLRCVERQARLFFHFTEVLDTSREIEVNDEVEFTVIQEPGLAYNNSRLQAIRIK
FBpp0246894
CSD
777
836
IYRGFIAVMKENFGFIETLSHDEEVFFHFSNYLGNPNWLELGQEVEYTLAPNGNTSVSGN
FBpp0246894
CSD
936
1002
KKRSTVDSIKGQFGFLNFEVEDGKKLFFHMSEVQGNTVALHPGDTVEFSVVTNQRNGKSSACNVLKI
Links
Other
CSD
family RBPs
Other
Drosophila willistoni
RBPs
11 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AAEL010018
Aedes aegypti
AAEL010018
N
0.730
GE21305
Drosophila yakuba
FBgn0238572
N
0.960
GJ12391
Drosophila virilis
FBgn0199634
N
0.900
GM24938
Drosophila sechellia
FBgn0179800
N
0.962
GI12487
Drosophila mojavensis
FBgn0135244
N
0.962
GH16406
Drosophila grimshawi
FBgn0123877
N
0.965
GG15082
Drosophila erecta
FBgn0107336
N
0.962
GF10107
Drosophila ananassae
FBgn0087148
N
0.972
Unr
Drosophila melanogaster
FBgn0035895
N
0.962
AGAP004937
Anopheles gambiae
AGAP004937
N
0.747
GA23356-RA
Drosophila pseudoobscura
FBgn0244758
N
0.972