CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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GG15082
(
Drosophila erecta
)
CSD
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00313 (CSD)
IPR002059
FBgn0107336
T17084_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0133628
CSD
182
247
RETGIIEKLLHSYGFIQCCERQARLFFHFSQFSGNIDHLKIGDPVEFEMTYDRRTGKPIASQVSKI
FBpp0133628
CSD
270
333
SANNVLNSSETTGRISYENRGECFFLPYTKDDVEGNVNLRAGDKVSFQIATNQRGNLGACHIRL
FBpp0133628
CSD
341
409
KYRGVVCSMKESFGFIERADVVKEIFFHFSEAEGNVELRPGDDVEFTIQTRSSASVPPQGREFACNITR
FBpp0133628
CSD
513
580
REQGTIASLKEGFGFLRCVERQARLFFHFTEVLDTSREIDINDEVEFTVIQEPGLAYNNSRLQAIRIK
FBpp0133628
CSD
759
820
VYRGFIAVMKENFGFIETLSHDEEVFFHFSNYMGNPNWLELGQEVEYTLARNGNTSVSGNCL
FBpp0133628
CSD
918
984
KKRATVDSIKGQFGFLNFEVEDGKKLFFHMSEVQGNTVALHPGDTVEFSVVTNQRNGKSSACNVLKI
Links
Other
CSD
family RBPs
Other
Drosophila erecta
RBPs
11 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Unr
Drosophila melanogaster
FBgn0035895
N
1.000
GM24938
Drosophila sechellia
FBgn0179800
N
1.000
GE21305
Drosophila yakuba
FBgn0238572
N
0.997
GF10107
Drosophila ananassae
FBgn0087148
N
0.972
GA23356-RA
Drosophila pseudoobscura
FBgn0244758
N
0.970
GH16406
Drosophila grimshawi
FBgn0123877
N
0.965
GI12487
Drosophila mojavensis
FBgn0135244
N
0.965
GK17751
Drosophila willistoni
FBgn0219750
N
0.962
GJ12391
Drosophila virilis
FBgn0199634
N
0.907
AGAP004937
Anopheles gambiae
AGAP004937
N
0.751
AAEL010018
Aedes aegypti
AAEL010018
N
0.738