VDAG_01960 (Verticillium dahliae)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 VDAG_01960 T17903_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
VDAG_01960T0 KH 137 192
VDAG_01960T0 KH 239 307

Links

Other KH family RBPs
Other Verticillium dahliae RBPs

37 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
BC1G_04554 Botrytis cinerea BC1G_04554 N 0.731
ANIA_04431 Aspergillus nidulans CADANIAG00006023 N 0.760
AO090023000853 Aspergillus oryzae CADAORAG00007942 N 0.776
NFIA_109000 Neosartorya fischeri CADNFIAG00009878 N 0.762
e_gw1.3.1237.1 Nectria haematococca e_gw1.3.1237.1 N 0.730
estExt_fgenesh1_pg.C_130006 Neurospora tetrasperma estExt_fgenesh1_pg.C_130006 N 0.872
estExt_fgenesh1_pm.C_70243 Myceliophthora thermophila estExt_fgenesh1_pm.C_70243 N 0.849
estExt_Genewise1Plus.C_100691 Neurospora discreta estExt_Genewise1Plus.C_100691 N 0.864
estExt_Genewise1Plus.C_chr_120306 Mycosphaerella graminicola estExt_Genewise1Plus.C_chr_120306 N 0.754
fgenesh1_pm.C_scaffold_12000103 Trichoderma atroviride fgenesh1_pm.C_scaffold_12000103 N 0.810
fgenesh1_pm.C_scaffold_17000077 Mycosphaerella fijiensis fgenesh1_pm.C_scaffold_17000077 N 0.768
fgenesh2_kg.6_#_197_#_798_1_CCPH_CCPI_EXTA Thielavia terrestris fgenesh2_kg.6_#_197_#_798_1_CCPH_CCPI_EXTA N 0.825
gw1.2.55.1 Trichoderma virens gw1.2.55.1 N 0.802
estExt_Genewise1.C_21959 Cryphonectria parasitica estExt_Genewise1.C_21959 N 0.810
GSTUMT00003892001 Tuber melanosporum GSTUMT00003892001 N 0.760
Pa_3_6460 Podospora anserina Pa_3_6460 N 0.849
Pc22g18420 Penicillium chrysogenum Pc22g18420 N 0.744
An04g01620 Aspergillus niger CADANGAG00003873 N 0.768
AFUA_4G07220 Aspergillus fumigatus CADAFUAG00008115 N 0.770
AFLA_112630 Aspergillus flavus CADAFLAG00004997 N 0.776
BDBG_02628 Blastomyces dermatitidis BDBG_02628 N 0.776
CIMG_04080 Coccidioides immitis CIMG_04080 N 0.730
CPSG_03190 Coccidioides posadasii CPSG_03190 N 0.730
FGSG_12899 Fusarium graminearum FGSG_12899 N 0.778
FOXG_08033 Fusarium oxysporum FOXG_08033 N 0.825
FVEG_04953 Fusarium verticillioides FVEG_04953 N 0.802
GLRG_05217 Colletotrichum graminicola GLRG_05217 N 0.858
HCAG_05583 Histoplasma capsulatum HCAG_05583 N 0.768
MCYG_01186 Microsporum canis MCYG_01186 N 0.720
MGYG_01738 Microsporum gypseum MGYG_01738 N 0.712
PABG_07569 Paracoccidioides brasiliensis PABG_07569 N 0.768
SS1G_03925 Sclerotinia sclerotiorum SS1G_03925 N 0.810
TERG_07604 Trichophyton rubrum TERG_07604 N 0.712
TESG_01394 Trichophyton tonsurans TESG_01394 N 0.712
VDBG_01592 Verticillium albo atrum VDBG_01592 N 1.000
ACLA_046540 Aspergillus clavatus CADACLAG00004448 N 0.762
PMAA_027060 Penicillium marneffei PMAA_027060 N 0.720