GSVIVG00023231001 (Vitis vinifera)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 GSVIVG00023231001 T20098_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
GSVIVT00023231001 KH 144 204

Links

Other KH family RBPs
Other Vitis vinifera RBPs

31 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AT1G09660 Arabidopsis thaliana AT1G09660-TAIR-G N 0.869
cassava412.valid.m1 Manihot esculenta cassava412.valid.m1 N 0.738
Cucsa.114230 Cucumis sativus Cucsa.114230 N 0.852
e_gw1.23.297.1 Selaginella moellendorfii e_gw1.23.297.1 N 0.738
estExt_fgenesh1_pm.C_2690009 Physcomitrella patens estExt_fgenesh1_pm.C_2690009 N 0.721
estExt_Genewise1.C_2260018 Physcomitrella patens estExt_Genewise1.C_2260018 N 0.754
GRMZM2G092182 Zea mays GRMZM2G092182 N 0.705
GRMZM2G125531 Zea mays GRMZM2G125531 N 0.841
Medtr2g005410 Medicago truncatula Medtr2g005410 N 0.918
Medtr3g016780 Medicago truncatula Medtr3g016780 N 0.705
chr6.LjT09E22.140.nd Lotus japonicus chr6.LjT09E22.140.nd N 0.792
MDP0000077749 Malus x domestica MDP0000077749 N 0.716
MDP0000300654 Malus x domestica MDP0000300654 N 0.725
MDP0000306088 Malus x domestica MDP0000306088 N 0.714
cassava411.valid.m1 Manihot esculenta cassava411.valid.m1 N 0.738
cassava410.valid.m1 Manihot esculenta cassava410.valid.m1 N 0.738
cassava13904.valid.m1 Manihot esculenta cassava13904.valid.m1 N 0.892
AT4G26480 Arabidopsis thaliana AT4G26480-TAIR-G N 0.721
AT5G56140 Arabidopsis thaliana AT5G56140-TAIR-G N 0.710
BGIOSIBCE004530 Oryza indica BGIOSIBCE004530 N 0.852
BGIOSIBCE019075 Oryza indica BGIOSIBCE019075 N 0.800
BRADI2G57220 Brachypodium distachyon BRADI2G57220 N 0.836
XM_002892469.1 Arabidopsis lyrata fgenesh2_kg.1__1021__AT1G09660.1 N 0.852
XM_002867517.1 Arabidopsis lyrata fgenesh2_kg.7__1597__AT4G26480.1 N 0.754
XM_002864390.1 Arabidopsis lyrata fgenesh2_kg.8__1516__AT5G56140.1 N 0.710
LOC_Os01g66300 Oryza sativa LOC_Os01g66300 N 0.852
LOC_Os05g34670 Oryza sativa LOC_Os05g34670 N 0.800
SB03G042090 Sorghum bicolor Sb03g042090 N 0.836
cassava13306.valid.m1 Manihot esculenta cassava13306.valid.m1 N 0.803
cassava13307.valid.m1 Manihot esculenta cassava13307.valid.m1 N 0.803
ppa009432m Prunus persica ppa009432m N 0.704