CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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CpipJ_CPIJ014704
(
Culex pipiens
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
CpipJ_CPIJ014704
T28993_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CpipJ_CPIJ014704-RA
RRM
193
262
VFCMQLSQRIRARDLEEFFSSVGKVRDVRLITCNKTKRFKGIAYIEFRDPESVALALGLSGQRLLGIPIS
CpipJ_CPIJ014704-RA
RRM
291
361
LYVGSLHFNITEDMLRGIFEPFGKIDNIQLIMDSDTGRSKGYGFITFHNADDAKKALEQLNGFELAGRPMK
CpipJ_CPIJ014704-RA
RRM
461
517
IEDDVIEECNKHGGVLHVYVDKQSPAGNVYVKCPSIATAVLAVNALHGRWFAGRVIA
Links
Other
RRM
family RBPs
Other
Culex pipiens
RBPs
60 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CLUG_00059
Candida lusitaniae
CLUG_00059
N
0.000