CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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DGIL_AUG5s1025g3t1
(
Acyrtosiphon pisum
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
DGIL_AUG5s1025g3t1
T31962_0.6
DroSpeGe (2008-Jul-18)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
DGIL_AUG5s1025g3t1
RRM
93
160
LSVSALHPKASDEQVKEILYREYRKFGEFSVKISHELDDRVAYVCFRSSEDARDAKHSKPRISLFDKI
DGIL_AUG5s1025g3t1
RRM
316
385
LFAGNLEVSISDEELRRIFGRYGVVEDIDVKRPLPGTGNAYAFVRYQNLDMAHRAKVELSGQYLGKFQCK
DGIL_AUG5s1025g3t1
RRM
397
461
IWVGGLGPWTSLAQLEQEFDRFGVIKKIEYVKGDICAYIQFESIDAATAAVKEMRGVALGGSEHK
Links
Other
RRM
family RBPs
Other
Acyrtosiphon pisum
RBPs
21 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
GA14827-RA
Drosophila pseudoobscura
FBgn0074854
N
0.000
GL17875
Drosophila persimilis
FBgn0155478
N
0.000
GJ12847
Drosophila virilis
FBgn0200082
N
0.000