ENSCSAVG00000001398 (Ciona savignyi)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSCSAVG00000001398 T35951_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCSAVP00000002373 RRM 299 362

Links

Other RRM family RBPs
Other Ciona savignyi RBPs

1 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
RBMX Homo sapiens ENSG00000147274 D 0.000
RBMXL2 Pan troglodytes ENSPTRG00000003312 I 0.000
HNRPG_PANTR Pan troglodytes ENSPTRG00000000933 I 0.000
ENSPPYG00000020771 Pongo pygmaeus ENSPPYG00000020771 I 0.000
ENSPPYG00000019152 Pongo pygmaeus ENSPPYG00000019152 I 0.000
ENSPPYG00000001177 Pongo pygmaeus ENSPPYG00000001177 I 0.000
RBMXL3 Oryzias latipes ENSORLG00000001692 I 0.000
ENSOCUG00000028230 Oryctolagus cuniculus ENSOCUG00000028230 I 0.000
RBMX Oryctolagus cuniculus ENSOCUG00000024093 I 0.000
ENSOCUG00000021095 Oryctolagus cuniculus ENSOCUG00000021095 I 0.000
RBMXL1 Oryctolagus cuniculus ENSOCUG00000007220 I 0.000
ENSOANG00000011670 Ornithorhynchus anatinus ENSOANG00000011670 I 0.000
Rbmxl2 Mus musculus ENSMUSG00000073894 I 0.000
ENSMUSG00000049235 Mus musculus ENSMUSG00000049235 I 0.000
Rbmxrt Mus musculus ENSMUSG00000037070 I 0.000
Rbmx Mus musculus ENSMUSG00000031134 I 0.000
XR_023586.1 Pan troglodytes ENSPTRG00000004121 I 0.000
AAH70649 Xenopus laevis AAH70649 I 0.000
RBMX Pan troglodytes ENSPTRG00000034071 I 0.000
Ame_R020019 Ailuropoda melanoleuca Ame_R020019 I 0.000
Ame_R008043 Ailuropoda melanoleuca Ame_R008043 I 0.000
RBMXL1 Vicugna pacos ENSVPAG00000005826 I 0.000
ENSVPAG00000002726 Vicugna pacos ENSVPAG00000002726 I 0.000
RBMXL1 Tursiops truncatus ENSTTRG00000007322 I 0.000
ENSTTRG00000003238 Tursiops truncatus ENSTTRG00000003238 I 0.000
RBMX Tarsius syrichta ENSTSYG00000009555 I 0.000
RBMXL3 Takifugu rubripes ENSTRUG00000006031 I 0.000
RBMXL3 Tetraodon nigroviridis ENSTNIG00000016844 I 0.000
RBMX Taeniopygia guttata ENSTGUG00000002135 I 0.000
RBMXL1 Sus scrofa ENSSSCG00000012703 I 0.000
D4AE41_RAT Rattus norvegicus ENSRNOG00000028858 I 0.000
D3ZT57_RAT Rattus norvegicus ENSRNOG00000021946 I 0.000
Rbmxrtl Rattus norvegicus ENSRNOG00000012138 I 0.000
Rbmx Rattus norvegicus ENSRNOG00000000866 I 0.000
XM_001367159.1 Monodelphis domestica ENSMODG00000014054 I 0.000
RBMXL1 Myotis lucifugus ENSMLUG00000013209 I 0.000
LOC100054583 Equus caballus ENSECAG00000021380 I 0.000
Rbmxl2 Dipodomys ordii ENSDORG00000010267 I 0.000
RBMXL1 Dasypus novemcinctus ENSDNOG00000017199 I 0.000
ENSDNOG00000009042 Dasypus novemcinctus ENSDNOG00000009042 I 0.000
rbmx Danio rerio ENSDARG00000014244 I 0.000
RBMX Cavia porcellus ENSCPOG00000012164 I 0.000
RBMXL1 Callithrix jacchus ENSCJAG00000032899 I 0.000
LOC100415631 Callithrix jacchus ENSCJAG00000022240 I 0.000
ENSCJAG00000016247 Callithrix jacchus ENSCJAG00000016247 I 0.000
ENSCJAG00000013619 Callithrix jacchus ENSCJAG00000013619 I 0.000
LOC100406653 Callithrix jacchus ENSCJAG00000003626 I 0.000
RBMXL1 Canis familiaris ENSCAFG00000018962 I 0.000
HNRPG_BOVIN Bos taurus ENSBTAG00000036140 I 0.000
D3JUI8_BOVIN Bos taurus ENSBTAG00000013308 I 0.000
HNRPG_BOVIN Bos taurus ENSBTAG00000011807 I 0.000
RBMX Felis catus ENSFCAG00000004779 I 0.000
RBMXL2 Homo sapiens ENSG00000170748 I 0.000
RBMXL1 Microcebus murinus ENSMICG00000006856 I 0.000
RBMX Meleagris gallopavo ENSMGAG00000003594 I 0.000
ENSMEUG00000015892 Macropus eugenii ENSMEUG00000015892 I 0.000
O97560_MACEU Macropus eugenii ENSMEUG00000013834 I 0.000
ENSLAFG00000022169 Loxodonta africana ENSLAFG00000022169 I 0.000
ENSLAFG00000020807 Loxodonta africana ENSLAFG00000020807 I 0.000
ENSLAFG00000014037 Loxodonta africana ENSLAFG00000014037 I 0.000
ENSLAFG00000005568 Loxodonta africana ENSLAFG00000005568 I 0.000
RBMXL1 Gorilla gorilla ENSGGOG00000027619 I 0.000
RBMXL3 Gorilla gorilla ENSGGOG00000027260 I 0.000
Q2VIN1_9PRIM Gorilla gorilla ENSGGOG00000012016 I 0.000
Q5ZKQ9_CHICK Gallus gallus ENSGALG00000006457 I 0.000
RBMXL3 Gasterosteus aculeatus ENSGACG00000017237 I 0.000
RBMXL1 Homo sapiens ENSG00000213516 I 0.000
RBMXL3 Homo sapiens ENSG00000175718 I 0.000
ENSACAG00000009551 Anolis carolinensis ENSACAG00000009551 I 0.000