LOC100052786 (Equus caballus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSECAG00000009910 T36602_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSECAP00000007929 RRM 171 239
ENSECAP00000007929 RRM 268 338

Links

Other RRM family RBPs
Other Equus caballus RBPs

39 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PK08637.1 Cannabis sativa PK08637.1 N 0.000
cassava8072.valid.m1 Manihot esculenta cassava8072.valid.m1 N 0.000
cassava8073.valid.m1 Manihot esculenta cassava8073.valid.m1 N 0.000
Cucsa.240830 Cucumis sativus Cucsa.240830 N 0.000
Glyma03g00470.1 Glycine max Glyma03g00470.1 N 0.000
Glyma04g06080.1 Glycine max Glyma04g06080.1 N 0.000
Glyma07g14870.1 Glycine max Glyma07g14870.1 N 0.000
mgf009210m Mimulus guttatus mgf009210m N 0.000
Medtr3g138980 Medicago truncatula Medtr3g138980 N 0.000
chr1.CM0133.940.nd Lotus japonicus chr1.CM0133.940.nd N 0.000
MDP0000245995 Malus x domestica MDP0000245995 N 0.000
MDP0000268597 Malus x domestica MDP0000268597 N 0.000
cassava18372.valid.m1 Manihot esculenta cassava18372.valid.m1 N 0.000
cassava18371.valid.m1 Manihot esculenta cassava18371.valid.m1 N 0.000
ATEIF3B-2 Arabidopsis thaliana AT5G25780-TAIR-G N 0.000
EIF3B Arabidopsis thaliana AT5G27640-TAIR-G N 0.000
BGIOSIBCE033128 Oryza indica BGIOSIBCE033128 N 0.000
BRADI1G13850 Brachypodium distachyon BRADI1G13850 N 0.000
BRADI4G40280 Brachypodium distachyon BRADI4G40280 N 0.000
XM_002872218.1 Arabidopsis lyrata fgenesh2_kg.6__2697__AT5G25780.1 N 0.000
LOC_Os10g41960 Oryza sativa LOC_Os10g41960 N 0.000
B9HB90_POPTR Populus trichocarpa POPTR_0006s28330 N 0.000
POPTR_0018s02940 Populus trichocarpa POPTR_0018s02940 N 0.000
SB01G028520 Sorghum bicolor Sb01g028520 N 0.000
29848.m004501 Ricinus communis 29848.m004501 N 0.000
PDK_20s1307762g001 Phoenix dactylifera PDK_20s1307762g001 N 0.000