CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSMLUG00000004992
(
Myotis lucifugus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSMLUG00000004992
T38655_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMLUP00000004549
RRM
95
159
LLLSNLDFRVSDADIQQLFAEFGPLKQAAVHYDRSGRSLGTAHVHFERKADALGARKQYNGVPLD
Links
Other
RRM
family RBPs
Other
Myotis lucifugus
RBPs
81 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ENSXETG00000017599
Xenopus tropicalis
ENSXETG00000017599
D
0.000
RBM42
Homo sapiens
ENSG00000126254
D
0.000
AAI29698
Xenopus laevis
AAI29698
I
0.000
RBM42
Spermophilus tridecemlineatus
ENSSTOG00000013050
I
0.000
RBM42
Sus scrofa
ENSSSCG00000002905
I
0.000
RBM42
Sorex araneus
ENSSARG00000010724
I
0.000
Rbm42
Rattus norvegicus
ENSRNOG00000024278
I
0.000
RBM42
Pteropus vampyrus
ENSPVAG00000012815
I
0.000
RBM42
Pan troglodytes
ENSPTRG00000010852
I
0.000
ENSPPYG00000009871
Pongo pygmaeus
ENSPPYG00000009871
I
0.000
RBM42
Procavia capensis
ENSPCAG00000013053
I
0.000
RBM42
Oryzias latipes
ENSORLG00000003387
I
0.000
RBM42
Tetraodon nigroviridis
ENSTNIG00000011669
I
0.000
RBM42
Takifugu rubripes
ENSTRUG00000004663
I
0.000
RBM42
Tarsius syrichta
ENSTSYG00000014688
I
0.000
A2VDB3
Xenopus laevis
A2VDB3
I
0.000
XP_002167334.1
Hydra magnipapillata
XP_002167334.1
I
0.000
Minc13155
Meloidogyne incognita
Minc13155
I
0.000
Ame_R009099
Ailuropoda melanoleuca
Ame_R009099
I
0.000
estExt_fgenesh2_pg.C_7640002
Branchiostoma floridae
estExt_fgenesh2_pg.C_7640002
I
0.000
estExt_fgenesh2_pg.C_360096
Branchiostoma floridae
estExt_fgenesh2_pg.C_360096
I
0.000
e_gw.92.129.1
Nematostella vectensis
e_gw.92.129.1
I
0.000
e_gw1.16.225.1
Lottia gigantea
e_gw1.16.225.1
I
0.000
tag-262
Caenorhabditis elegans
Y54H5A.3
I
0.000
Ppa-tag-262
Pristionchus pacificus
PPA14507
I
0.000
RBM42
Ochotona princeps
ENSOPRG00000001229
I
0.000
RBM42
Otolemur garnettii
ENSOGAG00000004144
I
0.000
RBM42
Oryctolagus cuniculus
ENSOCUG00000003337
I
0.000
RBM42
Canis familiaris
ENSCAFG00000006925
I
0.000
RBM42_BOVIN
Bos taurus
ENSBTAG00000013440
I
0.000
RBM42
Anolis carolinensis
ENSACAG00000005495
I
0.000
CRE29329
Caenorhabditis remanei
CRE29329
I
0.000
CJA09414
Caenorhabditis japonica
CJA09414
I
0.000
CBN12017
Caenorhabditis brenneri
CBN12017
I
0.000
CBG21313
Caenorhabditis briggsae
CBG21313
I
0.000
amel4_ncbi_hmm2520
Apis mellifera
amel4_ncbi_hmm2520
I
0.000
WUBG_05387
Wuchereria bancrofti
WUBG_05387
I
0.000
LOAG_04208
Loa loa
LOAG_04208
I
0.000
RBM42
Callithrix jacchus
ENSCJAG00000010220
I
0.000
RBM42
Cavia porcellus
ENSCPOG00000012365
I
0.000
rbm42
Danio rerio
ENSDARG00000039910
I
0.000
Rbm42
Mus musculus
ENSMUSG00000036733
I
0.000
RBM42
Monodelphis domestica
ENSMODG00000013957
I
0.000
RBM42
Macaca mulatta
ENSMMUG00000018954
I
0.000
RBM42
Myotis lucifugus
ENSMLUG00000011334
I
0.000
RBM42
Microcebus murinus
ENSMICG00000009880
I
0.000
ENSMEUG00000016300
Macropus eugenii
ENSMEUG00000016300
I
0.000
RBM42
Gorilla gorilla
ENSGGOG00000009972
I
0.000
RBM42
Gasterosteus aculeatus
ENSGACG00000004170
I
0.000
RBM42
Erinaceus europaeus
ENSEEUG00000004841
I
0.000
LOC100051102
Equus caballus
ENSECAG00000018215
I
0.000
Bm1_40380
Brugia malayi
Bm1_40380
I
0.000
estExt_fgenesh2_pg.C_90157
Monosiga brevicollis
estExt_fgenesh2_pg.C_90157
N
0.000