Minc13155 (Meloidogyne incognita)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Minc13155 T57845_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
CG2931
M138_0.6 		Drosophila melanogaster DACUAAG RNAcompete
Ray et al.(2013)
RNCMPT00147 		0.746
RBM42
M142_0.6 		Homo sapiens AACUAMG RNAcompete
Ray et al.(2013)
RNCMPT00151 		0.718
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
Minc13155a RRM 180 250
Minc13155c RRM 153 223
Minc13155d RRM 137 207
Minc13155e RRM 28 98

Links

Other RRM family RBPs
Other Meloidogyne incognita RBPs

66 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
WUBG_05387 Wuchereria bancrofti WUBG_05387 I 0.859
Ppa-tag-262 Pristionchus pacificus PPA14507 I 0.859
Bm1_40380 Brugia malayi Bm1_40380 I 0.859
LOAG_04208 Loa loa LOAG_04208 I 0.859
CRE29329 Caenorhabditis remanei CRE29329 I 0.845
tag-262 Caenorhabditis elegans Y54H5A.3 I 0.845
CBG21313 Caenorhabditis briggsae CBG21313 I 0.845
CBN12017 Caenorhabditis brenneri CBN12017 I 0.845
CJA09414 Caenorhabditis japonica CJA09414 I 0.831
AAEL010642 Aedes aegypti AAEL010642 I 0.775
SPPG_03010 Spizellomyces punctatus SPPG_03010 I 0.761
e_gw1.30.201.1 Daphnia pulex e_gw1.30.201.1 I 0.761
AGAP010200 Anopheles gambiae AGAP010200 I 0.761
GM10617 Drosophila sechellia FBgn0165563 I 0.746
CG2931 Drosophila melanogaster FBgn0037342 D 0.746
GJ22705 Drosophila virilis FBgn0209809 I 0.746
GH22277 Drosophila grimshawi FBgn0129737 I 0.746
GK12952 Drosophila willistoni FBgn0214961 I 0.746
GA15528-RA Drosophila pseudoobscura FBgn0075545 I 0.746
GF11626 Drosophila ananassae FBgn0088666 I 0.746
GL22151 Drosophila persimilis FBgn0159743 I 0.746
e_gw1.16.225.1 Lottia gigantea e_gw1.16.225.1 I 0.746
estExt_fgenesh2_pg.C_360096 Branchiostoma floridae estExt_fgenesh2_pg.C_360096 I 0.746
GE24162 Drosophila yakuba FBgn0241294 I 0.746
BGIBMGA005213 Bombyx mori BGIBMGA005213 I 0.746
amel4_ncbi_hmm2520 Apis mellifera amel4_ncbi_hmm2520 I 0.746
estExt_fgenesh2_pg.C_7640002 Branchiostoma floridae estExt_fgenesh2_pg.C_7640002 I 0.746
PTSG_04228 Salpingoeca rosetta PTSG_04228 I 0.732
GG10948 Drosophila erecta FBgn0103251 I 0.732
PHUM106890 Pediculus humanus PHUM106890 I 0.732
GI23084 Drosophila mojavensis FBgn0145811 I 0.732
GD19605 Drosophila simulans FBgn0191097 I 0.732
RBM42 Sus scrofa ENSSSCG00000002905 I 0.718
RBM42 Spermophilus tridecemlineatus ENSSTOG00000013050 I 0.718
RBM42 Tarsius syrichta ENSTSYG00000014688 I 0.718
RBM42 Sorex araneus ENSSARG00000010724 I 0.718
Ame_R009099 Ailuropoda melanoleuca Ame_R009099 I 0.718
RBM42 Ochotona princeps ENSOPRG00000001229 I 0.718
RBM42 Homo sapiens ENSG00000126254 D 0.718
RBM42 Erinaceus europaeus ENSEEUG00000004841 I 0.718
RBM42 Gorilla gorilla ENSGGOG00000009972 I 0.718
ENSMEUG00000016300 Macropus eugenii ENSMEUG00000016300 I 0.718
RBM42 Microcebus murinus ENSMICG00000009880 I 0.718
LOC100051102 Equus caballus ENSECAG00000018215 I 0.718
RBM42 Cavia porcellus ENSCPOG00000012365 I 0.718
RBM42_BOVIN Bos taurus ENSBTAG00000013440 I 0.718
RBM42 Canis familiaris ENSCAFG00000006925 I 0.718
ENSCING00000006773 Ciona intestinalis ENSCING00000006773 I 0.718
RBM42 Callithrix jacchus ENSCJAG00000010220 I 0.718
Rbm42 Rattus norvegicus ENSRNOG00000024278 I 0.718
RBM42 Myotis lucifugus ENSMLUG00000011334 I 0.718
RBM42 Macaca mulatta ENSMMUG00000018954 I 0.718
RBM42 Procavia capensis ENSPCAG00000013053 I 0.718
ENSPPYG00000009871 Pongo pygmaeus ENSPPYG00000009871 I 0.718
RBM42 Otolemur garnettii ENSOGAG00000004144 I 0.718
RBM42 Pan troglodytes ENSPTRG00000010852 I 0.718
RBM42 Monodelphis domestica ENSMODG00000013957 I 0.718
Rbm42 Mus musculus ENSMUSG00000036733 I 0.718
RBM42 Oryctolagus cuniculus ENSOCUG00000003337 I 0.718
RBM42 Pteropus vampyrus ENSPVAG00000012815 I 0.718
RBM42 Anolis carolinensis ENSACAG00000005495 I 0.704
RBM42 Oryzias latipes ENSORLG00000003387 I 0.704
RBM42 Gasterosteus aculeatus ENSGACG00000004170 I 0.704
RBM42 Takifugu rubripes ENSTRUG00000004663 I 0.704
RBM42 Tetraodon nigroviridis ENSTNIG00000011669 I 0.704