CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
RBM23
(
Oryctolagus cuniculus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSOCUG00000002006
T39606_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOCUP00000001734
RRM
172
241
VLCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCDIQAVPLAIGLTGQRLLGVPIM
ENSOCUP00000001734
RRM
269
339
LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECGRRALEQLNGFELAGRPMR
Links
Other
RRM
family RBPs
Other
Oryctolagus cuniculus
RBPs
39 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
RBM3
Homo sapiens
ENSG00000102317
D
0.000
Ame_R011907
Ailuropoda melanoleuca
Ame_R011907
I
0.000
XR_023694.1
Pan troglodytes
ENSPTRG00000021864
I
0.000
ENSPPYG00000020314
Pongo pygmaeus
ENSPPYG00000020314
I
0.000
ENSOCUG00000002271
Oryctolagus cuniculus
ENSOCUG00000002271
I
0.000
CIRBP
Ornithorhynchus anatinus
ENSOANG00000012230
I
0.000
Cirbp
Mus musculus
ENSMUSG00000045193
I
0.000
Rbm3
Mus musculus
ENSMUSG00000031167
I
0.000
CIRBP
Monodelphis domestica
ENSMODG00000005290
I
0.000
LOC706175
Macaca mulatta
ENSMMUG00000022101
I
0.000
CIRBP
Pteropus vampyrus
ENSPVAG00000005629
I
0.000
RBM3
Pteropus vampyrus
ENSPVAG00000015630
I
0.000
Ame_R005750
Ailuropoda melanoleuca
Ame_R005750
I
0.000
CIRBP
Tursiops truncatus
ENSTTRG00000011049
I
0.000
RBM3
Tursiops truncatus
ENSTTRG00000008587
I
0.000
CIRBP
Taeniopygia guttata
ENSTGUG00000000884
I
0.000
CIRBP
Sus scrofa
ENSSSCG00000013427
I
0.000
ENSSSCG00000004801
Sus scrofa
ENSSSCG00000004801
I
0.000
ENSSSCG00000004800
Sus scrofa
ENSSSCG00000004800
I
0.000
Cirbp
Rattus norvegicus
ENSRNOG00000015999
I
0.000
Rbm3
Rattus norvegicus
ENSRNOG00000005387
I
0.000
XM_001098948.1
Macaca mulatta
ENSMMUG00000004439
I
0.000
CIRBP
Meleagris gallopavo
ENSMGAG00000010253
I
0.000
LOC100394350
Callithrix jacchus
ENSCJAG00000005504
I
0.000
RBM3
Choloepus hoffmanni
ENSCHOG00000007642
I
0.000
ENSCAFG00000023295
Canis familiaris
ENSCAFG00000023295
I
0.000
CIRBP
Canis familiaris
ENSCAFG00000019506
I
0.000
XM_549003.1
Canis familiaris
ENSCAFG00000016002
I
0.000
Q3ZBA4_BOVIN
Bos taurus
ENSBTAG00000025848
I
0.000
Q3SZN4_BOVIN
Bos taurus
ENSBTAG00000007480
I
0.000
RBM3
Anolis carolinensis
ENSACAG00000013718
I
0.000
RBM3
Cavia porcellus
ENSCPOG00000003553
I
0.000
Rbm3
Dipodomys ordii
ENSDORG00000000182
I
0.000
LOC100051736
Equus caballus
ENSECAG00000024257
I
0.000
CIRBP
Loxodonta africana
ENSLAFG00000032156
I
0.000
RBM3
Loxodonta africana
ENSLAFG00000007003
I
0.000
RBM3
Gorilla gorilla
ENSGGOG00000005864
I
0.000
CIRBP
Gorilla gorilla
ENSGGOG00000002338
I
0.000
Q45KQ2_CHICK
Gallus gallus
ENSGALG00000012225
I
0.000
CIRBP
Homo sapiens
ENSG00000099622
I
0.000
CIRBP
Felis catus
ENSFCAG00000013724
I
0.000
RBM3
Felis catus
ENSFCAG00000002245
I
0.000
CIRBP
Anolis carolinensis
ENSACAG00000000441
I
0.000