ELAVL3 (Sorex araneus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSSARG00000005949 T41310_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
ELAVL4
M313_0.6 		Homo sapiens Sequence logo not available CYCUCCYUCYCYC RIP-chip
Cook et al.(2011)
619_19846595 		0.764
ELAVL4
M315_0.6 		Homo sapiens Sequence logo not available UUUUUUUUUWAAA RIP-chip
Cook et al.(2011)
619_19846595.2 		0.764
ELAVL4
M314_0.6 		Homo sapiens Sequence logo not available KUUUGUUUKKUUU RIP-chip
Cook et al.(2011)
619_19846595.1 		0.764
ELAVL2
M330_0.6 		Homo sapiens RWUUUAUUUWR SELEX
Cook et al.(2011)
784_7972035 		0.755
ELAVL2
M329_0.6 		Homo sapiens RWUUUAUUUWR SELEX
Cook et al.(2011)
783_7972035 		0.755
ELAVL2
M328_0.6 		Homo sapiens MUYCUUUWUWUUY SELEX
Cook et al.(2011)
782_8497264 		0.755
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSSARP00000005396 RRM 39 77
ENSSARP00000005396 RRM 125 193
ENSSARP00000005396 RRM 284 354

Links

Other RRM family RBPs
Other Sorex araneus RBPs

115 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ELAVL4 Homo sapiens ENSG00000162374 D 0.756
ELAVL2 Homo sapiens ENSG00000107105 D 0.746
ELAVL2 Ochotona princeps ENSOPRG00000012874 I 0.746
Elavl3 Rattus norvegicus ENSRNOG00000013752 I 0.820
Elavl4 Rattus norvegicus ENSRNOG00000023601 I 0.756
ELAVL2 Sorex araneus ENSSARG00000005702 I 0.746
ELAVL4 Sorex araneus ENSSARG00000010733 I 0.756
ELAVL2 Sus scrofa ENSSSCG00000005130 I 0.746
ELAVL3 Sus scrofa ENSSSCG00000013617 I 0.829
ELAVL4 Spermophilus tridecemlineatus ENSSTOG00000002834 I 0.922
ELAVL2 Tupaia belangeri ENSTBEG00000017759 I 0.855
ELAVL2 Taeniopygia guttata ENSTGUG00000001349 I 0.742
ELAVL4 Taeniopygia guttata ENSTGUG00000008597 I 0.756
ELAVL2 Tetraodon nigroviridis ENSTNIG00000011312 I 0.732
Elavl2 Rattus norvegicus ENSRNOG00000006853 I 0.746
ELAVL3 Pteropus vampyrus ENSPVAG00000014893 I 0.829
ELAVL4 Ochotona princeps ENSOPRG00000015300 I 0.756
ELAVL2 Oryzias latipes ENSORLG00000004217 I 0.741
ELAVL3 Oryzias latipes ENSORLG00000005379 I 0.793
ELAVL4 Oryzias latipes ENSORLG00000017130 I 0.756
ELAVL4 Procavia capensis ENSPCAG00000008215 I 0.756
ELAVL2 Procavia capensis ENSPCAG00000014998 I 0.768
ENSPPYG00000001367 Pongo pygmaeus ENSPPYG00000001367 I 0.756
ENSPPYG00000019166 Pongo pygmaeus ENSPPYG00000019166 I 0.746
ELAVL4 Pan troglodytes ENSPTRG00000000723 I 0.756
ELAVL3 Pan troglodytes ENSPTRG00000010506 I 0.833
ELAVL2 Pan troglodytes ENSPTRG00000020830 I 0.746
ELAVL1 Pteropus vampyrus ENSPVAG00000002299 I 0.744
ELAVL2 Pteropus vampyrus ENSPVAG00000002688 I 0.746
ELAVL4 Tetraodon nigroviridis ENSTNIG00000015485 I 0.751
ELAVL3 Tetraodon nigroviridis ENSTNIG00000018572 I 0.790
Ame_R009760 Ailuropoda melanoleuca Ame_R009760 I 0.756
AAA96943 Xenopus laevis AAA96943 I 0.751
AAA96944 Xenopus laevis AAA96944 I 0.792
AAA96945 Xenopus laevis AAA96945 I 0.761
AAH94189 Xenopus laevis AAH94189 I 0.751
AAH99348 Xenopus laevis AAH99348 I 0.761
AAI69769 Xenopus laevis AAI69769 I 0.792
AAI70539 Xenopus laevis AAI70539 I 0.751
CAA59430 Xenopus laevis CAA59430 I 0.751
CBF67567 Xenopus laevis CBF67567 I 0.761
CBU92440 Xenopus laevis CBU92440 I 0.761
Q91584 Xenopus laevis Q91584 I 0.792
Ame_R009570 Ailuropoda melanoleuca Ame_R009570 I 0.829
Ame_R004766 Ailuropoda melanoleuca Ame_R004766 I 0.746
ELAVL4 Takifugu rubripes ENSTRUG00000000523 I 0.751
ELAVL2 Takifugu rubripes ENSTRUG00000007867 I 0.736
ELAVL3 Takifugu rubripes ENSTRUG00000010719 I 0.801
ELAVL4 Tarsius syrichta ENSTSYG00000004130 I 0.756
ELAVL2 Tarsius syrichta ENSTSYG00000013066 I 0.735
ELAVL3 Tursiops truncatus ENSTTRG00000001789 I 0.829
ELAVL1 Tursiops truncatus ENSTTRG00000010180 I 0.739
ELAVL2 Tursiops truncatus ENSTTRG00000011656 I 0.742
ELAVL2 Vicugna pacos ENSVPAG00000005109 I 0.746
ELAVL4 Vicugna pacos ENSVPAG00000011606 I 0.756
elavl4 Xenopus tropicalis ENSXETG00000008680 I 0.761
elavl3 Xenopus tropicalis ENSXETG00000016741 I 0.789
Q91903 Xenopus laevis Q91903 I 0.751
ELAVL4 Otolemur garnettii ENSOGAG00000016990 I 0.756
ELAVL4 Anolis carolinensis ENSACAG00000004527 I 0.756
elavl4 Danio rerio ENSDARG00000045639 I 0.753
ELAVL4 Dasypus novemcinctus ENSDNOG00000002932 I 0.756
Elavl3 Dipodomys ordii ENSDORG00000002538 I 0.810
Elavl2 Dipodomys ordii ENSDORG00000010437 I 0.746
Elavl4 Dipodomys ordii ENSDORG00000012729 I 0.756
ELAVL2 Equus caballus ENSECAG00000020142 I 0.746
LOC100056901 Equus caballus ENSECAG00000020594 I 0.744
LOC100051268 Equus caballus ENSECAG00000022284 I 0.756
ELAVL4 Erinaceus europaeus ENSEEUG00000008766 I 0.756
ELAVL2 Echinops telfairi ENSETEG00000006134 I 0.746
ELAVL3 Homo sapiens ENSG00000196361 I 0.829
ELAVL4 Gasterosteus aculeatus ENSGACG00000011152 I 0.756
elavl2 Danio rerio ENSDARG00000040732 I 0.732
elavl3 Danio rerio ENSDARG00000014420 I 0.801
ELAVL3 Anolis carolinensis ENSACAG00000016958 I 0.797
ELAVL2 Anolis carolinensis ENSACAG00000017521 I 0.751
ELAVL3 Bos taurus ENSBTAG00000014412 I 0.829
A2VDK5_BOVIN Bos taurus ENSBTAG00000021046 I 0.756
ELAVL2 Canis familiaris ENSCAFG00000001688 I 0.746
ELAVL4 Canis familiaris ENSCAFG00000003927 I 0.756
ELAVL3 Canis familiaris ENSCAFG00000017350 I 0.829
ELAVL4 Choloepus hoffmanni ENSCHOG00000002464 I 0.756
ELAVL2 Callithrix jacchus ENSCJAG00000008064 I 0.746
ELAVL4 Callithrix jacchus ENSCJAG00000013725 I 0.756
ENSCPOG00000002044 Cavia porcellus ENSCPOG00000002044 I 0.756
ELAVL2 Cavia porcellus ENSCPOG00000010472 I 0.746
ELAVL3 Gasterosteus aculeatus ENSGACG00000013839 I 0.801
ELAVL2 Gasterosteus aculeatus ENSGACG00000019484 I 0.732
ELAVL2 Myotis lucifugus ENSMLUG00000014210 I 0.742
LOC708195 Macaca mulatta ENSMMUG00000010038 I 0.746
ELAVL4 Macaca mulatta ENSMMUG00000021933 I 0.756
ELAVL4 Monodelphis domestica ENSMODG00000001300 I 0.756
LOC100015949 Monodelphis domestica ENSMODG00000003936 I 0.751
ELAVL3 Monodelphis domestica ENSMODG00000006653 I 0.806
Elavl3 Mus musculus ENSMUSG00000003410 I 0.820
Elavl2 Mus musculus ENSMUSG00000008489 I 0.746
Elavl4 Mus musculus ENSMUSG00000028546 I 0.756
ELAVL2 Ornithorhynchus anatinus ENSOANG00000009634 I 0.866
ELAVL2 Oryctolagus cuniculus ENSOCUG00000005891 I 0.746
ELAVL4 Oryctolagus cuniculus ENSOCUG00000016262 I 0.756
ELAVL4 Myotis lucifugus ENSMLUG00000006226 I 0.756
ELAVL4 Microcebus murinus ENSMICG00000003286 I 0.756
Q9PW22_CHICK Gallus gallus ENSGALG00000010533 I 0.756
ELAVL2 Gallus gallus ENSGALG00000015799 I 0.737
ELAVL4 Gorilla gorilla ENSGGOG00000000634 I 0.756
ELAVL2 Gorilla gorilla ENSGGOG00000003678 I 0.746
ELAVL3 Gorilla gorilla ENSGGOG00000008635 I 0.829
ELAVL4 Loxodonta africana ENSLAFG00000001087 I 0.756
ELAVL3 Loxodonta africana ENSLAFG00000005013 I 0.829
ELAVL2 Loxodonta africana ENSLAFG00000009938 I 0.746
ELAVL2 Macropus eugenii ENSMEUG00000006499 I 0.916
ELAVL4 Macropus eugenii ENSMEUG00000007145 I 0.756
ELAVL3 Macropus eugenii ENSMEUG00000016706 I 0.797
ELAVL4 Meleagris gallopavo ENSMGAG00000010928 I 0.756
ELAVL3 Otolemur garnettii ENSOGAG00000007072 I 0.829