ELAVL1 (Pteropus vampyrus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSPVAG00000002299 T40845_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
ELAVL1
M127_0.6 		Homo sapiens UUKRUUU RNAcompete
Ray et al.(2013)
RNCMPT00136 		0.834
ELAVL1
M112_0.6 		Homo sapiens UUURKUU RNAcompete
Ray et al.(2013)
RNCMPT00117 		0.834
ELAVL1
M108_0.6 		Homo sapiens UUWGUUU RNAcompete
Ray et al.(2013)
RNCMPT00112 		0.834
ELAVL1
M031_0.6 		Homo sapiens UUDUUUU RNAcompete
Ray et al.(2013)
RNCMPT00032 		0.834
ELAVL1
M327_0.6 		Homo sapiens Sequence logo not available KKNWWDNNNUKNNUUNUNNH RIP-chip
Cook et al.(2011)
714_14981256 		0.834
ELAVL1
M232_0.6 		Homo sapiens UUUUUUK RNAcompete
Ray et al.(2013)
RNCMPT00274 		0.834
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSPVAP00000002175 RRM 22 59
ENSPVAP00000002175 RRM 108 176
ENSPVAP00000002175 RRM 246 316

Links

Other RRM family RBPs
Other Pteropus vampyrus RBPs

49 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ELAVL1 Tursiops truncatus ENSTTRG00000010180 I 0.994
ELAVL1 Loxodonta africana ENSLAFG00000004219 I 0.834
ELAVL1 Microcebus murinus ENSMICG00000009699 I 0.834
Ame_R010167 Ailuropoda melanoleuca Ame_R010167 I 0.834
ELAVL1 Gorilla gorilla ENSGGOG00000006100 I 0.834
ENSCAFG00000018353 Canis familiaris ENSCAFG00000018353 I 0.834
LOC100060819 Equus caballus ENSECAG00000019459 I 0.834
ELAVL1 Felis catus ENSFCAG00000014947 I 0.834
ELAVL1 Homo sapiens ENSG00000066044 D 0.834
ELAVL1 Tarsius syrichta ENSTSYG00000008248 I 0.834
ELAVL1 Myotis lucifugus ENSMLUG00000008101 I 0.834
ELAVL1 Macaca mulatta ENSMMUG00000006544 I 0.834
ELAVL1 Otolemur garnettii ENSOGAG00000012877 I 0.834
ENSPPYG00000009496 Pongo pygmaeus ENSPPYG00000009496 I 0.834
ELAVL1 Pan troglodytes ENSPTRG00000010413 I 0.834
ELAVL1 Monodelphis domestica ENSMODG00000005041 I 0.834
Elavl1 Rattus norvegicus ENSRNOG00000001069 I 0.829
ELAVL1 Ochotona princeps ENSOPRG00000009691 I 0.829
Q3ZCE2_BOVIN Bos taurus ENSBTAG00000000613 I 0.829
D7R608_RABIT Oryctolagus cuniculus ENSOCUG00000015871 I 0.829
Elavl1 Dipodomys ordii ENSDORG00000009158 I 0.829
Elavl1 Mus musculus ENSMUSG00000040028 I 0.829
ELAVL1 Meleagris gallopavo ENSMGAG00000001015 I 0.825
ELAVL1 Taeniopygia guttata ENSTGUG00000000118 I 0.825
Q9PW24_CHICK Gallus gallus ENSGALG00000000726 I 0.825
ELAVL1 Dasypus novemcinctus ENSDNOG00000008797 I 0.820
ELAVL1 Sus scrofa ENSSSCG00000013592 I 0.815
ELAVL1 Spermophilus tridecemlineatus ENSSTOG00000009130 I 0.815
elavl1 Xenopus tropicalis ENSXETG00000008752 I 0.810
AAH86269 Xenopus laevis AAH86269 I 0.806
Q5U259 Xenopus laevis Q5U259 I 0.806
AAA96942 Xenopus laevis AAA96942 I 0.801
ELAVL1 Tetraodon nigroviridis ENSTNIG00000004733 I 0.796
ELAVL2 Macropus eugenii ENSMEUG00000006499 I 0.789
ELAVL4 Spermophilus tridecemlineatus ENSSTOG00000002834 I 0.767
AAI16460 Xenopus laevis AAI16460 I 0.761
Q1JQ73 Xenopus laevis Q1JQ73 I 0.761
ELAVL2 Ornithorhynchus anatinus ENSOANG00000009634 I 0.750
elavl1 Danio rerio ENSDARG00000038695 I 0.750
ELAVL1 Oryzias latipes ENSORLG00000012435 I 0.746
ELAVL3 Sorex araneus ENSSARG00000005949 I 0.744
ELAVL1 Gasterosteus aculeatus ENSGACG00000010657 I 0.744
ELAVL1 Tetraodon nigroviridis ENSTNIG00000019823 I 0.731
ELAVL2 Tupaia belangeri ENSTBEG00000017759 I 0.728
ELAVL1 Callithrix jacchus ENSCJAG00000031727 I 0.727
hug Danio rerio ENSDARG00000016405 I 0.722
ELAVL1 Takifugu rubripes ENSTRUG00000004559 I 0.717
ELAVL1 Gasterosteus aculeatus ENSGACG00000013329 I 0.717
ELAVL1 Oryzias latipes ENSORLG00000000087 I 0.717