GSVIVG00013098001 (Vitis vinifera)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 GSVIVG00013098001 T44657_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
GSVIVT00013098001 RRM 6 72

Links

Other RRM family RBPs
Other Vitis vinifera RBPs

42 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ppa024222m Prunus persica ppa024222m N 0.761
GRMZM2G035719 Zea mays GRMZM2G035719 N 0.725
mgf014593m Mimulus guttatus mgf014593m N 0.791
mgf007506m Mimulus guttatus mgf007506m N 0.836
Glyma09g33960.1 Glycine max Glyma09g33960.1 N 0.826
Glyma01g01950.1 Glycine max Glyma01g01950.1 N 0.826
Cucsa.322000 Cucumis sativus Cucsa.322000 N 0.783
Cucsa.318780 Cucumis sativus Cucsa.318780 N 0.716
cassava28770.m1 Manihot esculenta cassava28770.m1 N 0.716
GRMZM2G051890 Zea mays GRMZM2G051890 N 0.806
GRMZM2G102808 Zea mays GRMZM2G102808 N 0.836
GRMZM2G114789 Zea mays GRMZM2G114789 N 0.701
PDK_20s1613681g001 Phoenix dactylifera PDK_20s1613681g001 N 0.791
PDK_20s1346002g005 Phoenix dactylifera PDK_20s1346002g005 N 0.806
PDK_20s1330821g002 Phoenix dactylifera PDK_20s1330821g002 N 0.731
MDP0000596287 Malus x domestica MDP0000596287 N 0.836
MDP0000243576 Malus x domestica MDP0000243576 N 0.701
MDP0000177505 Malus x domestica MDP0000177505 N 0.791
Medtr8g077770 Medicago truncatula Medtr8g077770 N 0.821
Medtr5g029540 Medicago truncatula Medtr5g029540 N 0.791
cassava25245.valid.m1 Manihot esculenta cassava25245.valid.m1 N 0.779
cassava25244.valid.m1 Manihot esculenta cassava25244.valid.m1 N 0.768
XM_002867996.1 Arabidopsis lyrata fgenesh2_kg.7__2538__AT4G17720.1 N 0.750
BRADI1G51740 Brachypodium distachyon BRADI1G51740 N 0.836
BGIOSIBCE020376 Oryza indica BGIOSIBCE020376 N 0.821
BGIOSIBCE016670 Oryza indica BGIOSIBCE016670 N 0.716
BGIOSIBCE012743 Oryza indica BGIOSIBCE012743 N 0.725
AT5G46870 Arabidopsis thaliana AT5G46870-TAIR-G N 0.746
AT4G17720 Arabidopsis thaliana AT4G17720-TAIR-G N 0.750
XM_002865109.1 Arabidopsis lyrata Al_scaffold_0008_128 N 0.746
GSVIVG00011624001 Vitis vinifera GSVIVG00011624001 N 0.701
GSVIVG00024381001 Vitis vinifera GSVIVG00024381001 N 0.881
LOC_Os03g50560 Oryza sativa LOC_Os03g50560 N 0.725
30073.m002271 Ricinus communis 30073.m002271 N 0.881
29682.m000595 Ricinus communis 29682.m000595 N 0.791
SB10G000940 Sorghum bicolor Sb10g000940 N 0.821
B9GZI4_POPTR Populus trichocarpa POPTR_0003s09410 N 0.821
A9PE83_POPTR Populus trichocarpa POPTR_0001s02090 N 0.851
LOC_Os06g02240 Oryza sativa LOC_Os06g02240 N 0.821
LOC_Os04g53330 Oryza sativa LOC_Os04g53330 N 0.716
LOC_Os04g50790 Oryza sativa LOC_Os04g50790 N 0.706
PK05006.1 Cannabis sativa PK05006.1 N 0.910