29863.m001059 (Ricinus communis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 29863.m001059 T48699_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
29863.m001059 RRM 8 73
29863.m001059 RRM 115 170
29863.m001059 RRM 248 314
29863.m001059 RRM 358 424

Links

Other RRM family RBPs
Other Ricinus communis RBPs

27 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PK14373.1 Cannabis sativa PK14373.1 N 0.859
Cucsa.365870 Cucumis sativus Cucsa.365870 N 0.840
Glyma02g08870.1 Glycine max Glyma02g08870.1 N 0.859
Glyma10g36770.1 Glycine max Glyma10g36770.1 N 0.833
Glyma20g30820.1 Glycine max Glyma20g30820.1 N 0.848
mgf010164m Mimulus guttatus mgf010164m N 0.864
GRMZM2G052926 Zea mays GRMZM2G052926 N 0.702
GRMZM2G070113 Zea mays GRMZM2G070113 N 0.721
Medtr1g124970 Medicago truncatula Medtr1g124970 N 0.829
chr5.CM0052.230.nd Lotus japonicus chr5.CM0052.230.nd N 0.837
MDP0000043338 Malus x domestica MDP0000043338 N 0.706
PDK_20s1358001g002 Phoenix dactylifera PDK_20s1358001g002 N 0.822
cassava19040.valid.m1 Manihot esculenta cassava19040.valid.m1 N 0.920
cassava19039.valid.m1 Manihot esculenta cassava19039.valid.m1 N 0.920
cassava19038.valid.m1 Manihot esculenta cassava19038.valid.m1 N 0.920
XM_002893897.1 Arabidopsis lyrata Al_scaffold_0001_3801 N 0.859
PTB3 Arabidopsis thaliana AT1G43190-TAIR-G N 0.844
BRADI2G24150 Brachypodium distachyon BRADI2G24150 N 0.729
GSVIVG00034558001 Vitis vinifera GSVIVG00034558001 N 0.864
LOC_Os01g64770 Oryza sativa LOC_Os01g64770 N 0.719
LOC_Os05g36120 Oryza sativa LOC_Os05g36120 N 0.719
B9GT89_POPTR Populus trichocarpa POPTR_0002s06660 N 0.859
B9H7U5_POPTR Populus trichocarpa POPTR_0005s21660 N 0.876
SB09G021560 Sorghum bicolor Sb09g021560 N 0.721
cassava12743.valid.m1 Manihot esculenta cassava12743.valid.m1 N 0.924
cassava19037.valid.m1 Manihot esculenta cassava19037.valid.m1 N 0.920
ppa005775m Prunus persica ppa005775m N 0.878