RBM4B (Myotis lucifugus)
CCHC ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC)
PF00076 (RRM_1) 		IPR001878
IPR000504 		ENSMLUG00000001290 T07274_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
RBM4
M109_0.6 		Homo sapiens GCGCGSG RNAcompete
Ray et al.(2013)
RNCMPT00113 		0.917
RBM4
M050_0.6 		Homo sapiens GCGCGSS RNAcompete
Ray et al.(2013)
RNCMPT00052 		0.917
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSMLUP00000001182 RRM 5 62
ENSMLUP00000001182 RRM 76 138
ENSMLUP00000001182 CCHC ZF 156 173

Links

Other CCHC ZF,RRM family RBPs
Other Myotis lucifugus RBPs

67 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
A6MLC8_CALJA Callithrix jacchus ENSCJAG00000001294 I 0.917
Ame_R016449 Ailuropoda melanoleuca Ame_R016449 I 0.931
Ame_R016450 Ailuropoda melanoleuca Ame_R016450 I 0.917
ENSCAFG00000012388 Canis familiaris ENSCAFG00000012388 I 0.917
ENSCPOG00000013194 Cavia porcellus ENSCPOG00000013194 I 0.917
ENSDORG00000004538 Dipodomys ordii ENSDORG00000004538 I 0.910
ENSFCAG00000007393 Felis catus ENSFCAG00000007393 I 0.917
ENSGACG00000000822 Gasterosteus aculeatus ENSGACG00000000822 I 0.701
ENSGGOG00000014455 Gorilla gorilla ENSGGOG00000014455 I 0.917
ENSLAFG00000028147 Loxodonta africana ENSLAFG00000028147 I 0.924
ENSMEUG00000001445 Macropus eugenii ENSMEUG00000001445 I 0.917
ENSMICG00000003817 Microcebus murinus ENSMICG00000003817 I 0.917
ENSMMUG00000003366 Macaca mulatta ENSMMUG00000003366 I 0.806
ENSMODG00000008056 Monodelphis domestica ENSMODG00000008056 I 0.903
ENSMUSG00000056951 Mus musculus ENSMUSG00000056951 I 0.924
ENSOANG00000003143 Ornithorhynchus anatinus ENSOANG00000003143 I 0.924
ENSOANG00000011036 Ornithorhynchus anatinus ENSOANG00000011036 I 0.924
ENSOCUG00000004731 Oryctolagus cuniculus ENSOCUG00000004731 I 0.917
ENSOGAG00000015647 Otolemur garnettii ENSOGAG00000015647 I 0.910
ENSOPRG00000009149 Ochotona princeps ENSOPRG00000009149 I 0.924
ENSPCAG00000003393 Procavia capensis ENSPCAG00000003393 I 0.910
ENSPPYG00000003010 Pongo pygmaeus ENSPPYG00000003010 I 0.931
ENSPPYG00000003012 Pongo pygmaeus ENSPPYG00000003012 I 0.895
ENSPVAG00000010486 Pteropus vampyrus ENSPVAG00000010486 I 0.917
ENSSSCG00000012938 Sus scrofa ENSSSCG00000012938 I 0.917
ENSTBEG00000003727 Tupaia belangeri ENSTBEG00000003727 I 0.887
ENSTTRG00000011164 Tursiops truncatus ENSTTRG00000011164 I 0.924
ENSVPAG00000001949 Vicugna pacos ENSVPAG00000001949 I 0.917
LOC100058690 Equus caballus ENSECAG00000022940 I 0.917
LOC100058729 Equus caballus ENSECAG00000022987 I 0.931
LOC100394287 Callithrix jacchus ENSCJAG00000001263 I 0.903
LOC425562 Gallus gallus ENSGALG00000018992 I 0.903
LOC713553 Macaca mulatta ENSMMUG00000010577 I 0.931
Q2KIV3_BOVIN Bos taurus ENSBTAG00000000423 I 0.931
RBM4 Homo sapiens ENSG00000239306 D 0.917
Rbm4 Rattus norvegicus ENSRNOG00000019669 I 0.924
RBM4 Macaca mulatta ENSMMUG00000020363 I 0.917
RBM4 Homo sapiens ENSG00000173933 I 0.917
rbm4.1 Danio rerio ENSDARG00000036386 I 0.736
RBM4B Erinaceus europaeus ENSEEUG00000000058 I 0.917
RBM4B Spermophilus tridecemlineatus ENSSTOG00000011226 I 0.931
RBM4B Dasypus novemcinctus ENSDNOG00000019500 I 0.931
RBM4B Tupaia belangeri ENSTBEG00000003748 I 0.931
RBM4B Taeniopygia guttata ENSTGUG00000016779 I 0.889
RBM4B Cavia porcellus ENSCPOG00000013689 I 0.931
RBM4B Tursiops truncatus ENSTTRG00000011166 I 0.924
RBM4B Vicugna pacos ENSVPAG00000001950 I 0.924
RBM4B Choloepus hoffmanni ENSCHOG00000002892 I 0.931
RBM4B Canis familiaris ENSCAFG00000012378 I 0.931
RBM4B Anolis carolinensis ENSACAG00000007777 I 0.875
RBM4B Sorex araneus ENSSARG00000010710 I 0.931
Rbm4b Rattus norvegicus ENSRNOG00000019650 I 0.931
RBM4B Felis catus ENSFCAG00000007394 I 0.931
RBM4B Microcebus murinus ENSMICG00000003820 I 0.931
RBM4B Otolemur garnettii ENSOGAG00000015648 I 0.931
Rbm4b Mus musculus ENSMUSG00000033760 I 0.931
RBM4B Ochotona princeps ENSOPRG00000009158 I 0.931
RBM4B Loxodonta africana ENSLAFG00000002285 I 0.931
RBM4B Procavia capensis ENSPCAG00000003414 I 0.931
RBM4B Gorilla gorilla ENSGGOG00000011698 I 0.931
RBM4B Pan troglodytes ENSPTRG00000003935 I 0.931
RBM4B Homo sapiens ENSG00000173914 I 0.931
RBM4B Pteropus vampyrus ENSPVAG00000010487 I 0.931
RBM4_BOVIN Bos taurus ENSBTAG00000031688 I 0.924
RBM4_RABIT Oryctolagus cuniculus ENSOCUG00000006695 I 0.931
XM_001364763.1 Monodelphis domestica ENSMODG00000008047 I 0.903
XR_022144.1 Pan troglodytes ENSPTRG00000003934 I 0.917