RBM4B (Anolis carolinensis)
CCHC ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC)
PF00076 (RRM_1) 		IPR001878
IPR000504 		ENSACAG00000007777 T07198_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
RBM4
M109_0.6 		Homo sapiens GCGCGSG RNAcompete
Ray et al.(2013)
RNCMPT00113 		0.938
RBM4
M050_0.6 		Homo sapiens GCGCGSS RNAcompete
Ray et al.(2013)
RNCMPT00052 		0.938
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSACAP00000007625 RRM 4 66
ENSACAP00000007625 RRM 80 142
ENSACAP00000007625 CCHC ZF 160 177

Links

Other CCHC ZF,RRM family RBPs
Other Anolis carolinensis RBPs

69 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
LOC425562 Gallus gallus ENSGALG00000018992 I 0.958
RBM4B Taeniopygia guttata ENSTGUG00000016779 I 0.951
ENSOPRG00000009149 Ochotona princeps ENSOPRG00000009149 I 0.944
ENSOANG00000011036 Ornithorhynchus anatinus ENSOANG00000011036 I 0.944
RBM4_RABIT Oryctolagus cuniculus ENSOCUG00000006695 I 0.944
Q2KIV3_BOVIN Bos taurus ENSBTAG00000000423 I 0.944
RBM4B Otolemur garnettii ENSOGAG00000015648 I 0.944
Rbm4b Mus musculus ENSMUSG00000033760 I 0.944
LOC713553 Macaca mulatta ENSMMUG00000010577 I 0.944
XM_001364763.1 Monodelphis domestica ENSMODG00000008047 I 0.944
ENSMODG00000008056 Monodelphis domestica ENSMODG00000008056 I 0.944
RBM4B Ochotona princeps ENSOPRG00000009158 I 0.944
RBM4B Procavia capensis ENSPCAG00000003414 I 0.944
RBM4B Spermophilus tridecemlineatus ENSSTOG00000011226 I 0.944
RBM4B Tupaia belangeri ENSTBEG00000003748 I 0.944
ENSTTRG00000011164 Tursiops truncatus ENSTTRG00000011164 I 0.944
Ame_R016449 Ailuropoda melanoleuca Ame_R016449 I 0.944
RBM4B Sorex araneus ENSSARG00000010710 I 0.944
Rbm4b Rattus norvegicus ENSRNOG00000019650 I 0.944
ENSPPYG00000003010 Pongo pygmaeus ENSPPYG00000003010 I 0.944
RBM4B Pan troglodytes ENSPTRG00000003935 I 0.944
RBM4B Pteropus vampyrus ENSPVAG00000010487 I 0.944
RBM4B Microcebus murinus ENSMICG00000003820 I 0.944
ENSOANG00000003143 Ornithorhynchus anatinus ENSOANG00000003143 I 0.944
RBM4B Dasypus novemcinctus ENSDNOG00000019500 I 0.944
LOC100058729 Equus caballus ENSECAG00000022987 I 0.944
RBM4B Homo sapiens ENSG00000173914 I 0.944
RBM4B Choloepus hoffmanni ENSCHOG00000002892 I 0.944
RBM4B Canis familiaris ENSCAFG00000012378 I 0.944
RBM4B Felis catus ENSFCAG00000007394 I 0.944
RBM4B Gorilla gorilla ENSGGOG00000011698 I 0.944
RBM4_BOVIN Bos taurus ENSBTAG00000031688 I 0.944
ENSMEUG00000001445 Macropus eugenii ENSMEUG00000001445 I 0.944
RBM4B Loxodonta africana ENSLAFG00000002285 I 0.944
RBM4B Cavia porcellus ENSCPOG00000013689 I 0.944
ENSPVAG00000010486 Pteropus vampyrus ENSPVAG00000010486 I 0.938
ENSCPOG00000013194 Cavia porcellus ENSCPOG00000013194 I 0.938
ENSSSCG00000012938 Sus scrofa ENSSSCG00000012938 I 0.938
ENSCAFG00000012388 Canis familiaris ENSCAFG00000012388 I 0.938
ENSVPAG00000001949 Vicugna pacos ENSVPAG00000001949 I 0.938
RBM4 Homo sapiens ENSG00000239306 D 0.938
Rbm4 Rattus norvegicus ENSRNOG00000019669 I 0.938
A6MLC8_CALJA Callithrix jacchus ENSCJAG00000001294 I 0.938
Ame_R016450 Ailuropoda melanoleuca Ame_R016450 I 0.938
RBM4B Vicugna pacos ENSVPAG00000001950 I 0.938
RBM4B Tursiops truncatus ENSTTRG00000011166 I 0.938
XR_022144.1 Pan troglodytes ENSPTRG00000003934 I 0.938
RBM4 Homo sapiens ENSG00000173933 I 0.938
ENSOCUG00000004731 Oryctolagus cuniculus ENSOCUG00000004731 I 0.938
RBM4B Erinaceus europaeus ENSEEUG00000000058 I 0.938
ENSFCAG00000007393 Felis catus ENSFCAG00000007393 I 0.938
ENSMUSG00000056951 Mus musculus ENSMUSG00000056951 I 0.938
LOC100058690 Equus caballus ENSECAG00000022940 I 0.938
ENSLAFG00000028147 Loxodonta africana ENSLAFG00000028147 I 0.938
RBM4 Macaca mulatta ENSMMUG00000020363 I 0.938
ENSGGOG00000014455 Gorilla gorilla ENSGGOG00000014455 I 0.938
ENSMICG00000003817 Microcebus murinus ENSMICG00000003817 I 0.938
ENSOGAG00000015647 Otolemur garnettii ENSOGAG00000015647 I 0.931
ENSPCAG00000003393 Procavia capensis ENSPCAG00000003393 I 0.924
ENSDORG00000004538 Dipodomys ordii ENSDORG00000004538 I 0.924
LOC100394287 Callithrix jacchus ENSCJAG00000001263 I 0.924
ENSPPYG00000003012 Pongo pygmaeus ENSPPYG00000003012 I 0.903
RBM4B Myotis lucifugus ENSMLUG00000001290 I 0.875
ENSTBEG00000003727 Tupaia belangeri ENSTBEG00000003727 I 0.868
ENSMMUG00000003366 Macaca mulatta ENSMMUG00000003366 I 0.812
rbm4b Xenopus tropicalis ENSXETG00000026649 I 0.743
AAH82645 Xenopus laevis AAH82645 I 0.736
rbm4.1 Danio rerio ENSDARG00000036386 I 0.715
AAH73203 Xenopus laevis AAH73203 I 0.708