s_455576 (Phytophthora sojae)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 s_455576 T14821_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
s_455576 CCHC ZF 204 221

Links

Other CCHC ZF family RBPs
Other Phytophthora sojae RBPs

31 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAC59682 Xenopus laevis AAC59682 I 0.000
AAEL009326 Aedes aegypti AAEL009326 I 0.000
AAH43638 Xenopus laevis AAH43638 I 0.000
AAH73457 Xenopus laevis AAH73457 I 0.000
AAI31885 Xenopus laevis AAI31885 I 0.000
AAY79165 Xenopus laevis AAY79165 I 0.000
AAY79166 Xenopus laevis AAY79166 I 0.000
amel4_ncbi_hmm37854 Apis mellifera amel4_ncbi_hmm37854 I 0.000
Ame_R018977 Ailuropoda melanoleuca Ame_R018977 I 0.000
CPIJ019402 Culex quinquefasciatus CPIJ019402 I 0.000
CpipJ_CPIJ019402 Culex pipiens CpipJ_CPIJ019402 I 0.000
DGIL_AUG5s14500g26t1 Acyrtosiphon pisum DGIL_AUG5s14500g26t1 N 0.000
ENSPPYG00000014327 Pongo pygmaeus ENSPPYG00000014327 I 0.000
estExt_fgenesh1_pg.C_690020 Daphnia pulex estExt_fgenesh1_pg.C_690020 N 0.000
e_gw1.377.37.1 Capitella teleta e_gw1.377.37.1 N 0.000
Fmr1 Drosophila melanogaster FBgn0028734 D 0.000
FMR1 Canis familiaris ENSCAFG00000019085 I 0.000
FXR1 Macaca mulatta ENSMMUG00000012105 I 0.000
FXR1 Pan troglodytes ENSPTRG00000015656 I 0.000
FXR1 Pteropus vampyrus ENSPVAG00000002823 I 0.000
FXR1 Sus scrofa ENSSSCG00000011769 I 0.000
FXR1 Taeniopygia guttata ENSTGUG00000010560 I 0.000
FXR1 Tarsius syrichta ENSTSYG00000001610 I 0.000
FXR1 Tursiops truncatus ENSTTRG00000014698 I 0.000
FXR1 Vicugna pacos ENSVPAG00000003384 I 0.000
fxr1 Xenopus tropicalis ENSXETG00000019441 I 0.000
FXR1 Oryzias latipes ENSORLG00000011787 I 0.000
FXR1 Canis familiaris ENSCAFG00000011582 I 0.000
FXR1 Erinaceus europaeus ENSEEUG00000006823 I 0.000
fxr1 Danio rerio ENSDARG00000022968 I 0.000
FXR1 Cavia porcellus ENSCPOG00000010418 I 0.000
FXR1 Callithrix jacchus ENSCJAG00000012802 I 0.000
FXR1 Echinops telfairi ENSETEG00000006891 I 0.000
FXR1 Homo sapiens ENSG00000114416 D 0.000
FXR1 Anolis carolinensis ENSACAG00000003918 I 0.000
FXR1 Gorilla gorilla ENSGGOG00000009957 I 0.000
FXR1 Loxodonta africana ENSLAFG00000001908 I 0.000
FXR1 Meleagris gallopavo ENSMGAG00000009602 I 0.000
FXR1 Myotis lucifugus ENSMLUG00000006840 I 0.000
FXR1 Monodelphis domestica ENSMODG00000021294 I 0.000
Fxr1 Mus musculus ENSMUSG00000027680 I 0.000
FXR1 Ornithorhynchus anatinus ENSOANG00000011045 I 0.000
FXR1 Oryctolagus cuniculus ENSOCUG00000023518 I 0.000
FXR1 Equus caballus ENSECAG00000007560 I 0.000
FXR1_BOVIN Bos taurus ENSBTAG00000016457 I 0.000
FXR2 Oryzias latipes ENSORLG00000011571 I 0.000
GD20735 Drosophila simulans FBgn0192201 I 0.000
GE24705 Drosophila yakuba FBgn0241810 I 0.000
GF17134 Drosophila ananassae FBgn0094153 I 0.000
GG17303 Drosophila erecta FBgn0109530 I 0.000
GI24444 Drosophila mojavensis FBgn0147166 I 0.000
GJ10720 Drosophila virilis FBgn0197997 I 0.000
GK12202 Drosophila willistoni FBgn0214213 I 0.000
GM26187 Drosophila sechellia FBgn0181042 I 0.000
nasonia_NCBI_hmm462784 Nasonia vitripennis nasonia_NCBI_hmm462784 I 0.000
P51115 Xenopus laevis P51115 I 0.000
Q5F3S6_CHICK Gallus gallus ENSGALG00000008864 I 0.000
Q7ZTQ5 Xenopus laevis Q7ZTQ5 I 0.000