FXR1 (Tarsius syrichta)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSTSYG00000001610 T19668_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
FXR1
M152_0.6 		Homo sapiens AYGACR RNAcompete
Ray et al.(2013)
RNCMPT00161 		0.977
FXR2
M020_0.6 		Homo sapiens DGACRRR RNAcompete
Ray et al.(2013)
RNCMPT00020 		0.783
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTSYP00000001497 KH 203 262
ENSTSYP00000001497 KH 267 334

Links

Other KH family RBPs
Other Tarsius syrichta RBPs

91 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSPPYG00000014327 Pongo pygmaeus ENSPPYG00000014327 I 0.977
FXR1 Equus caballus ENSECAG00000007560 I 0.977
FXR1 Cavia porcellus ENSCPOG00000010418 I 0.977
FXR1 Pan troglodytes ENSPTRG00000015656 I 0.977
FXR1 Canis familiaris ENSCAFG00000011582 I 0.977
FXR1 Echinops telfairi ENSETEG00000006891 I 0.977
FXR1 Homo sapiens ENSG00000114416 D 0.977
FXR1 Myotis lucifugus ENSMLUG00000006840 I 0.977
FXR1 Macaca mulatta ENSMMUG00000012105 I 0.977
FXR1 Loxodonta africana ENSLAFG00000001908 I 0.977
FXR1 Gorilla gorilla ENSGGOG00000009957 I 0.977
FXR1 Oryctolagus cuniculus ENSOCUG00000023518 I 0.977
FXR1_BOVIN Bos taurus ENSBTAG00000016457 I 0.977
FXR1 Callithrix jacchus ENSCJAG00000012802 I 0.977
FXR1 Vicugna pacos ENSVPAG00000003384 I 0.977
Ame_R018977 Ailuropoda melanoleuca Ame_R018977 I 0.977
FXR1 Tursiops truncatus ENSTTRG00000014698 I 0.977
FXR1 Monodelphis domestica ENSMODG00000021294 I 0.969
FXR1 Ornithorhynchus anatinus ENSOANG00000011045 I 0.969
FXR1 Pteropus vampyrus ENSPVAG00000002823 I 0.969
Fxr1 Mus musculus ENSMUSG00000027680 I 0.969
FXR1 Sus scrofa ENSSSCG00000011769 I 0.969
FXR1 Meleagris gallopavo ENSMGAG00000009602 I 0.961
FXR1 Erinaceus europaeus ENSEEUG00000006823 I 0.961
Q5F3S6_CHICK Gallus gallus ENSGALG00000008864 I 0.961
FXR1 Taeniopygia guttata ENSTGUG00000010560 I 0.953
FXR1 Anolis carolinensis ENSACAG00000003918 I 0.953
fxr1 Xenopus tropicalis ENSXETG00000019441 I 0.945
FXR1 Ochotona princeps ENSOPRG00000009223 I 0.938
AAI31885 Xenopus laevis AAI31885 I 0.930
AAH43638 Xenopus laevis AAH43638 I 0.930
AAH73457 Xenopus laevis AAH73457 I 0.930
Q7ZTQ5 Xenopus laevis Q7ZTQ5 I 0.930
P51115 Xenopus laevis P51115 I 0.930
AAY79166 Xenopus laevis AAY79166 I 0.930
AAY79165 Xenopus laevis AAY79165 I 0.930
AAC59682 Xenopus laevis AAC59682 I 0.922
fxr1 Danio rerio ENSDARG00000022968 I 0.853
FXR1_RAT Rattus norvegicus ENSRNOG00000011938 I 0.852
FXR1 Gasterosteus aculeatus ENSGACG00000006052 I 0.829
FXR1 Oryzias latipes ENSORLG00000011787 I 0.829
FXR1 Dasypus novemcinctus ENSDNOG00000019065 I 0.820
Fxr1 Dipodomys ordii ENSDORG00000005853 I 0.820
FXR1 Takifugu rubripes ENSTRUG00000003486 I 0.806
FXR1 Tetraodon nigroviridis ENSTNIG00000003790 I 0.798
Q5ZHM3_CHICK Gallus gallus ENSGALG00000009177 I 0.794
FXR2 Oryzias latipes ENSORLG00000011571 I 0.792
FMR1 Canis familiaris ENSCAFG00000019085 I 0.792
Ame_R012967 Ailuropoda melanoleuca Ame_R012967 I 0.791
FXR2 Canis familiaris ENSCAFG00000016685 I 0.791
Fxr2 Mus musculus ENSMUSG00000018765 I 0.783
FXR2 Oryctolagus cuniculus ENSOCUG00000010393 I 0.783
Fxr2 Rattus norvegicus ENSRNOG00000011876 I 0.783
FXR2 Sus scrofa ENSSSCG00000017953 I 0.783
FXR2 Pteropus vampyrus ENSPVAG00000016306 I 0.783
FXR2 Spermophilus tridecemlineatus ENSSTOG00000005657 I 0.783
FXR2 Ochotona princeps ENSOPRG00000017108 I 0.783
FXR2 Monodelphis domestica ENSMODG00000007179 I 0.783
ENSPPYG00000007930 Pongo pygmaeus ENSPPYG00000007930 I 0.783
FXR2 Pan troglodytes ENSPTRG00000008698 I 0.783
FXR2 Tupaia belangeri ENSTBEG00000002514 I 0.783
FXR2 Felis catus ENSFCAG00000009620 I 0.783
FXR2 Macaca mulatta ENSMMUG00000013510 I 0.783
LOC100147323 Equus caballus ENSECAG00000007051 I 0.783
FXR2 Callithrix jacchus ENSCJAG00000015063 I 0.783
FXR2 Bos taurus ENSBTAG00000005462 I 0.783
FXR2 Vicugna pacos ENSVPAG00000000147 I 0.783
FXR2 Anolis carolinensis ENSACAG00000000561 I 0.783
FXR2 Erinaceus europaeus ENSEEUG00000013410 I 0.783
FXR2 Cavia porcellus ENSCPOG00000023303 I 0.783
FXR2 Homo sapiens ENSG00000129245 D 0.783
FXR2 Tursiops truncatus ENSTTRG00000010231 I 0.783
FXR2 Microcebus murinus ENSMICG00000014799 I 0.783
fmr1 Xenopus tropicalis ENSXETG00000019647 I 0.777
FXR2 Echinops telfairi ENSETEG00000018613 I 0.775
FXR2 Procavia capensis ENSPCAG00000013184 I 0.775
FXR2 Loxodonta africana ENSLAFG00000001114 I 0.775
AAI12953 Xenopus laevis AAI12953 I 0.769
AAI70204 Xenopus laevis AAI70204 I 0.769
Q2KHP9 Xenopus laevis Q2KHP9 I 0.769
FXR2 Dasypus novemcinctus ENSDNOG00000001047 I 0.767
P51113 Xenopus laevis P51113 I 0.762
AAC59683 Xenopus laevis AAC59683 I 0.762
FXR2 Takifugu rubripes ENSTRUG00000010696 I 0.754
FXR2 Myotis lucifugus ENSMLUG00000003438 I 0.752
FXR2 Tetraodon nigroviridis ENSTNIG00000005118 I 0.746
FMR1 Oryzias latipes ENSORLG00000009094 I 0.740
fmr1 Danio rerio ENSDARG00000037433 I 0.723
FMR1 Gasterosteus aculeatus ENSGACG00000018742 I 0.722
PHUM440700 Pediculus humanus PHUM440700 I 0.712
nasonia_NCBI_hmm462784 Nasonia vitripennis nasonia_NCBI_hmm462784 I 0.705