FXR1 (Erinaceus europaeus)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSEEUG00000006823 T18726_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
FXR1
M152_0.6 		Homo sapiens AYGACR RNAcompete
Ray et al.(2013)
RNCMPT00161 		0.984
FXR2
M020_0.6 		Homo sapiens DGACRRR RNAcompete
Ray et al.(2013)
RNCMPT00020 		0.767
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSEEUP00000006255 KH 220 279
ENSEEUP00000006255 KH 284 351

Links

Other KH family RBPs
Other Erinaceus europaeus RBPs

90 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
FXR1 Vicugna pacos ENSVPAG00000003384 I 0.984
ENSPPYG00000014327 Pongo pygmaeus ENSPPYG00000014327 I 0.984
Ame_R018977 Ailuropoda melanoleuca Ame_R018977 I 0.984
FXR1 Tursiops truncatus ENSTTRG00000014698 I 0.984
FXR1 Myotis lucifugus ENSMLUG00000006840 I 0.984
FXR1 Oryctolagus cuniculus ENSOCUG00000023518 I 0.984
FXR1 Pan troglodytes ENSPTRG00000015656 I 0.984
FXR1 Macaca mulatta ENSMMUG00000012105 I 0.984
FXR1 Gorilla gorilla ENSGGOG00000009957 I 0.984
FXR1 Loxodonta africana ENSLAFG00000001908 I 0.984
FXR1 Homo sapiens ENSG00000114416 D 0.984
FXR1 Equus caballus ENSECAG00000007560 I 0.984
FXR1 Echinops telfairi ENSETEG00000006891 I 0.984
FXR1 Callithrix jacchus ENSCJAG00000012802 I 0.984
FXR1 Cavia porcellus ENSCPOG00000010418 I 0.984
FXR1 Canis familiaris ENSCAFG00000011582 I 0.984
FXR1_BOVIN Bos taurus ENSBTAG00000016457 I 0.984
FXR1 Pteropus vampyrus ENSPVAG00000002823 I 0.977
FXR1 Ornithorhynchus anatinus ENSOANG00000011045 I 0.977
Fxr1 Mus musculus ENSMUSG00000027680 I 0.977
FXR1 Monodelphis domestica ENSMODG00000021294 I 0.977
FXR1 Sus scrofa ENSSSCG00000011769 I 0.977
FXR1 Tarsius syrichta ENSTSYG00000001610 I 0.961
FXR1 Meleagris gallopavo ENSMGAG00000009602 I 0.953
Q5F3S6_CHICK Gallus gallus ENSGALG00000008864 I 0.953
FXR1 Anolis carolinensis ENSACAG00000003918 I 0.945
FXR1 Taeniopygia guttata ENSTGUG00000010560 I 0.945
FXR1 Ochotona princeps ENSOPRG00000009223 I 0.938
fxr1 Xenopus tropicalis ENSXETG00000019441 I 0.938
P51115 Xenopus laevis P51115 I 0.922
AAY79165 Xenopus laevis AAY79165 I 0.922
AAH73457 Xenopus laevis AAH73457 I 0.922
AAI31885 Xenopus laevis AAI31885 I 0.922
AAY79166 Xenopus laevis AAY79166 I 0.922
Q7ZTQ5 Xenopus laevis Q7ZTQ5 I 0.914
AAH43638 Xenopus laevis AAH43638 I 0.914
AAC59682 Xenopus laevis AAC59682 I 0.914
FXR1_RAT Rattus norvegicus ENSRNOG00000011938 I 0.859
FXR1 Oryzias latipes ENSORLG00000011787 I 0.837
fxr1 Danio rerio ENSDARG00000022968 I 0.837
FXR1 Gasterosteus aculeatus ENSGACG00000006052 I 0.822
FXR1 Dasypus novemcinctus ENSDNOG00000019065 I 0.820
Fxr1 Dipodomys ordii ENSDORG00000005853 I 0.820
FXR1 Takifugu rubripes ENSTRUG00000003486 I 0.814
FXR1 Tetraodon nigroviridis ENSTNIG00000003790 I 0.806
FMR1 Canis familiaris ENSCAFG00000019085 I 0.800
Q5ZHM3_CHICK Gallus gallus ENSGALG00000009177 I 0.786
FXR2 Anolis carolinensis ENSACAG00000000561 I 0.783
FXR2 Oryzias latipes ENSORLG00000011571 I 0.777
FXR2 Canis familiaris ENSCAFG00000016685 I 0.775
Ame_R012967 Ailuropoda melanoleuca Ame_R012967 I 0.775
fmr1 Xenopus tropicalis ENSXETG00000019647 I 0.769
FXR2 Ochotona princeps ENSOPRG00000017108 I 0.767
FXR2 Felis catus ENSFCAG00000009620 I 0.767
FXR2 Callithrix jacchus ENSCJAG00000015063 I 0.767
FXR2 Homo sapiens ENSG00000129245 D 0.767
FXR2 Bos taurus ENSBTAG00000005462 I 0.767
FXR2 Vicugna pacos ENSVPAG00000000147 I 0.767
FXR2 Pteropus vampyrus ENSPVAG00000016306 I 0.767
Fxr2 Rattus norvegicus ENSRNOG00000011876 I 0.767
FXR2 Monodelphis domestica ENSMODG00000007179 I 0.767
Fxr2 Mus musculus ENSMUSG00000018765 I 0.767
FXR2 Oryctolagus cuniculus ENSOCUG00000010393 I 0.767
LOC100147323 Equus caballus ENSECAG00000007051 I 0.767
ENSPPYG00000007930 Pongo pygmaeus ENSPPYG00000007930 I 0.767
FXR2 Pan troglodytes ENSPTRG00000008698 I 0.767
FXR2 Cavia porcellus ENSCPOG00000023303 I 0.767
FXR2 Sus scrofa ENSSSCG00000017953 I 0.767
FXR2 Spermophilus tridecemlineatus ENSSTOG00000005657 I 0.767
FXR2 Erinaceus europaeus ENSEEUG00000013410 I 0.767
FXR2 Tupaia belangeri ENSTBEG00000002514 I 0.767
FXR2 Tursiops truncatus ENSTTRG00000010231 I 0.767
FXR2 Microcebus murinus ENSMICG00000014799 I 0.767
FXR2 Macaca mulatta ENSMMUG00000013510 I 0.767
AAI12953 Xenopus laevis AAI12953 I 0.762
Q2KHP9 Xenopus laevis Q2KHP9 I 0.762
AAI70204 Xenopus laevis AAI70204 I 0.762
FXR2 Echinops telfairi ENSETEG00000018613 I 0.760
FXR2 Loxodonta africana ENSLAFG00000001114 I 0.760
FXR2 Procavia capensis ENSPCAG00000013184 I 0.760
AAC59683 Xenopus laevis AAC59683 I 0.754
P51113 Xenopus laevis P51113 I 0.754
FXR2 Dasypus novemcinctus ENSDNOG00000001047 I 0.752
FMR1 Oryzias latipes ENSORLG00000009094 I 0.748
FXR2 Takifugu rubripes ENSTRUG00000010696 I 0.738
FXR2 Myotis lucifugus ENSMLUG00000003438 I 0.736
FXR2 Tetraodon nigroviridis ENSTNIG00000005118 I 0.731
FMR1 Gasterosteus aculeatus ENSGACG00000018742 I 0.729
fmr1 Danio rerio ENSDARG00000037433 I 0.715
PHUM440700 Pediculus humanus PHUM440700 I 0.705