CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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AFLA_112630
(
Aspergillus flavus
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
CADAFLAG00004997
T18189_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CADAFLAP00004997
KH
145
200
TKGSTQKMIKEETGADVTTRGNYYPDKSMATAANPPLYLHVTSTNKEGLEKAVDLI
CADAFLAP00004997
KH
247
315
IPGFNLRAQVVGQGGAYVKHIQQRTRCKVQIKGRGSGFMEPSTGRESEEPMFLHVAGPDPNDVKSAKEL
Links
Other
KH
family RBPs
Other
Aspergillus flavus
RBPs
39 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ACLA_046540
Aspergillus clavatus
CADACLAG00004448
N
0.913
AFUA_4G07220
Aspergillus fumigatus
CADAFUAG00008115
N
0.905
An04g01620
Aspergillus niger
CADANGAG00003873
N
0.960
ANIA_04431
Aspergillus nidulans
CADANIAG00006023
N
0.888
AO090023000853
Aspergillus oryzae
CADAORAG00007942
N
1.000
BC1G_04554
Botrytis cinerea
BC1G_04554
N
0.769
BDBG_02628
Blastomyces dermatitidis
BDBG_02628
N
0.848
CIMG_04080
Coccidioides immitis
CIMG_04080
N
0.754
CPSG_03190
Coccidioides posadasii
CPSG_03190
N
0.754
estExt_fgenesh1_pg.C_130006
Neurospora tetrasperma
estExt_fgenesh1_pg.C_130006
N
0.824
estExt_fgenesh1_pm.C_70243
Myceliophthora thermophila
estExt_fgenesh1_pm.C_70243
N
0.841
estExt_Genewise1.C_21959
Cryphonectria parasitica
estExt_Genewise1.C_21959
N
0.810
estExt_Genewise1Plus.C_100691
Neurospora discreta
estExt_Genewise1Plus.C_100691
N
0.824
estExt_Genewise1Plus.C_chr_120306
Mycosphaerella graminicola
estExt_Genewise1Plus.C_chr_120306
N
0.786
e_gw1.3.1237.1
Nectria haematococca
e_gw1.3.1237.1
N
0.722
fgenesh1_pm.C_scaffold_12000103
Trichoderma atroviride
fgenesh1_pm.C_scaffold_12000103
N
0.770
fgenesh1_pm.C_scaffold_17000077
Mycosphaerella fijiensis
fgenesh1_pm.C_scaffold_17000077
N
0.824
fgenesh2_kg.6_#_197_#_798_1_CCPH_CCPI_EXTA
Thielavia terrestris
fgenesh2_kg.6_#_197_#_798_1_CCPH_CCPI_EXTA
N
0.786
FGSG_12899
Fusarium graminearum
FGSG_12899
N
0.730
FOXG_08033
Fusarium oxysporum
FOXG_08033
N
0.762
FVEG_04953
Fusarium verticillioides
FVEG_04953
N
0.754
GLRG_05217
Colletotrichum graminicola
GLRG_05217
N
0.811
GSTUMT00003892001
Tuber melanosporum
GSTUMT00003892001
N
0.800
gw1.2.55.1
Trichoderma virens
gw1.2.55.1
N
0.762
HCAG_05583
Histoplasma capsulatum
HCAG_05583
N
0.840
MCYG_01186
Microsporum canis
MCYG_01186
N
0.784
MGYG_01738
Microsporum gypseum
MGYG_01738
N
0.776
NFIA_109000
Neosartorya fischeri
CADNFIAG00009878
N
0.913
PABG_07569
Paracoccidioides brasiliensis
PABG_07569
N
0.816
Pa_3_6460
Podospora anserina
Pa_3_6460
N
0.817
Pc22g18420
Penicillium chrysogenum
Pc22g18420
N
0.864
PMAA_027060
Penicillium marneffei
PMAA_027060
N
0.784
PTRG_04405
Pyrenophora tritici repentis
PTRG_04405
N
0.706
SNOG_05204
Stagonospora nodorum
SNOG_05204
N
0.714
SS1G_03925
Sclerotinia sclerotiorum
SS1G_03925
N
0.857
TERG_07604
Trichophyton rubrum
TERG_07604
N
0.776
TESG_01394
Trichophyton tonsurans
TESG_01394
N
0.776
VDAG_01960
Verticillium dahliae
VDAG_01960
N
0.776
VDBG_01592
Verticillium albo atrum
VDBG_01592
N
0.776