FXR1 (Oryzias latipes)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSORLG00000011787 T19290_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
FXR1
M152_0.6 		Homo sapiens AYGACR RNAcompete
Ray et al.(2013)
RNCMPT00161 		0.853
FXR2
M020_0.6 		Homo sapiens DGACRRR RNAcompete
Ray et al.(2013)
RNCMPT00020 		0.822
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSORLP00000014777 KH 220 279
ENSORLP00000014777 KH 283 351

Links

Other KH family RBPs
Other Oryzias latipes RBPs

95 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Genemark.6663_g Serpula lacrymans Genemark.6663_g N 0.000
Genemark.8053_g Serpula lacrymans Genemark.8053_g N 0.000
PGTG_03172 Puccinia graminis PGTG_03172 N 0.000
PGTG_03348 Puccinia graminis PGTG_03348 N 0.000
PGTG_05408 Puccinia graminis PGTG_05408 N 0.000
PGTG_09834 Puccinia graminis PGTG_09834 N 0.000
PGTG_12646 Puccinia graminis PGTG_12646 N 0.000
PGTG_14567 Puccinia graminis PGTG_14567 N 0.000
PGTG_15116 Puccinia graminis PGTG_15116 N 0.000
PGTG_16335 Puccinia graminis PGTG_16335 N 0.000
PGTG_18613 Puccinia graminis PGTG_18613 N 0.000
PGTG_20442 Puccinia graminis PGTG_20442 N 0.000
PTTG_01306 Puccinia triticina PTTG_01306 N 0.000
PTTG_04497 Puccinia triticina PTTG_04497 N 0.000
PTTG_06885 Puccinia triticina PTTG_06885 N 0.000
PTTG_07469 Puccinia triticina PTTG_07469 N 0.000
PTTG_08330 Puccinia triticina PTTG_08330 N 0.000
PTTG_08665 Puccinia triticina PTTG_08665 N 0.000
PTTG_08777 Puccinia triticina PTTG_08777 N 0.000
PTTG_09789 Puccinia triticina PTTG_09789 N 0.000
PTTG_10291 Puccinia triticina PTTG_10291 N 0.000
PTTG_10451 Puccinia triticina PTTG_10451 N 0.000
PTTG_10552 Puccinia triticina PTTG_10552 N 0.000
PTTG_10713 Puccinia triticina PTTG_10713 N 0.000
PTTG_10809 Puccinia triticina PTTG_10809 N 0.000
PTTG_11068 Puccinia triticina PTTG_11068 N 0.000
PTTG_11278 Puccinia triticina PTTG_11278 N 0.000
PTTG_11299 Puccinia triticina PTTG_11299 N 0.000
PTTG_11462 Puccinia triticina PTTG_11462 N 0.000
PTTG_11563 Puccinia triticina PTTG_11563 N 0.000