LOC_Os03g25970 (Oryza sativa)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 LOC_Os03g25970 T20138_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os03g25970.1 KH 41 99
LOC_Os03g25970.1 KH 139 206
LOC_Os03g25970.1 KH 281 334
LOC_Os03g25970.1 KH 366 433
LOC_Os03g25970.2 KH 41 99
LOC_Os03g25970.2 KH 139 206
LOC_Os03g25970.2 KH 281 334
LOC_Os03g25970.2 KH 366 433

Links

Other KH family RBPs
Other Oryza sativa RBPs

14 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
29005.m000257 Ricinus communis 29005.m000257 N 0.000
B9GUT0_POPTR Populus trichocarpa POPTR_0017s02890 N 0.000
B9H3A7_POPTR Populus trichocarpa POPTR_0004s08540 N 0.000
BGIOSIBCE027930 Oryza indica BGIOSIBCE027930 N 0.000
BRADI1G44147 Brachypodium distachyon BRADI1G44147 N 0.000
BRADI3G36320 Brachypodium distachyon BRADI3G36320 N 0.000
cassava30010.valid.m1 Manihot esculenta cassava30010.valid.m1 N 0.000
cassava30011.valid.m1 Manihot esculenta cassava30011.valid.m1 N 0.000
cassava30012.valid.m1 Manihot esculenta cassava30012.valid.m1 N 0.000
cassava35480.valid.m1 Manihot esculenta cassava35480.valid.m1 N 0.000
cassava6245.valid.m1 Manihot esculenta cassava6245.valid.m1 N 0.000
cassava6246.valid.m1 Manihot esculenta cassava6246.valid.m1 N 0.000
cassava9472.m1 Manihot esculenta cassava9472.m1 N 0.000
cassava9473.m1 Manihot esculenta cassava9473.m1 N 0.000
Cucsa.137040 Cucumis sativus Cucsa.137040 N 0.000
Glyma11g33670.1 Glycine max Glyma11g33670.1 N 0.000
Glyma18g04530.1 Glycine max Glyma18g04530.1 N 0.000
GRMZM2G054468 Zea mays GRMZM2G054468 N 0.000
GRMZM2G171921 Zea mays GRMZM2G171921 N 0.000
GSVIVG00030785001 Vitis vinifera GSVIVG00030785001 N 0.000
LOC_Os06g14470 Oryza sativa LOC_Os06g14470 N 0.000
LOC_Os08g33120 Oryza sativa LOC_Os08g33120 N 0.000
MDP0000202749 Malus x domestica MDP0000202749 N 0.000
MDP0000275263 Malus x domestica MDP0000275263 N 0.000
MDP0000299639 Malus x domestica MDP0000299639 N 0.000
Medtr3g087640 Medicago truncatula Medtr3g087640 N 0.000
Medtr3g087650 Medicago truncatula Medtr3g087650 N 0.000
PK16300.1 Cannabis sativa PK16300.1 N 0.000
ppa009623m Prunus persica ppa009623m N 0.000
ppa010358m Prunus persica ppa010358m N 0.000
SB07G020860 Sorghum bicolor Sb07g020860 N 0.000
SB10G009240 Sorghum bicolor Sb10g009240 N 0.000