BRADI3G36320 (Brachypodium distachyon)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 BRADI3G36320 T33247_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
BRADI3G36320.1 RRM 82 151

Links

Other RRM family RBPs
Other Brachypodium distachyon RBPs

64 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
LOC_Os08g33120 Oryza sativa LOC_Os08g33120 N 0.943
BGIOSIBCE027930 Oryza indica BGIOSIBCE027930 N 0.943
GRMZM2G171921 Zea mays GRMZM2G171921 N 0.929
SB07G020860 Sorghum bicolor Sb07g020860 N 0.929
ppa010358m Prunus persica ppa010358m N 0.786
Glyma11g33670.1 Glycine max Glyma11g33670.1 N 0.771
MDP0000202749 Malus x domestica MDP0000202749 N 0.771
Medtr4g078540 Medicago truncatula Medtr4g078540 N 0.771
ppa009623m Prunus persica ppa009623m N 0.771
Glyma18g04530.1 Glycine max Glyma18g04530.1 N 0.771
GSVIVG00025009001 Vitis vinifera GSVIVG00025009001 N 0.771
XM_002873013.1 Arabidopsis lyrata fgenesh2_kg.6__165__AT5G02530.1 N 0.757
cassava9473.m1 Manihot esculenta cassava9473.m1 N 0.757
cassava37747.valid.m1 Manihot esculenta cassava37747.valid.m1 N 0.757
cassava6246.valid.m1 Manihot esculenta cassava6246.valid.m1 N 0.757
cassava6245.valid.m1 Manihot esculenta cassava6245.valid.m1 N 0.757
cassava37746.valid.m1 Manihot esculenta cassava37746.valid.m1 N 0.757
cassava9472.m1 Manihot esculenta cassava9472.m1 N 0.757
Glyma11g15040.1 Glycine max Glyma11g15040.1 N 0.757
MDP0000275263 Malus x domestica MDP0000275263 N 0.757
MDP0000299639 Malus x domestica MDP0000299639 N 0.757
BRADI4G45380 Brachypodium distachyon BRADI4G45380 N 0.757
MDP0000251188 Malus x domestica MDP0000251188 N 0.757
MDP0000153894 Malus x domestica MDP0000153894 N 0.757
Glyma12g07010.1 Glycine max Glyma12g07010.1 N 0.757
MDP0000119945 Malus x domestica MDP0000119945 N 0.757
AT5G02530 Arabidopsis thaliana AT5G02530-TAIR-G N 0.757
Medtr3g087650 Medicago truncatula Medtr3g087650 N 0.743
PK16300.1 Cannabis sativa PK16300.1 N 0.743
Medtr3g087640 Medicago truncatula Medtr3g087640 N 0.743
mgf010207m Mimulus guttatus mgf010207m N 0.743
Glyma13g40930.1 Glycine max Glyma13g40930.1 N 0.743
Cucsa.172290 Cucumis sativus Cucsa.172290 N 0.743
cassava30011.valid.m1 Manihot esculenta cassava30011.valid.m1 N 0.743
SB10G009240 Sorghum bicolor Sb10g009240 N 0.743
29876.m000260 Ricinus communis 29876.m000260 N 0.743
cassava30012.valid.m1 Manihot esculenta cassava30012.valid.m1 N 0.743
cassava35480.valid.m1 Manihot esculenta cassava35480.valid.m1 N 0.743
Cucsa.137040 Cucumis sativus Cucsa.137040 N 0.743
cassava30010.valid.m1 Manihot esculenta cassava30010.valid.m1 N 0.743
GSVIVG00030785001 Vitis vinifera GSVIVG00030785001 N 0.729
LOC_Os12g01010 Oryza sativa LOC_Os12g01010 N 0.729
B9GUT0_POPTR Populus trichocarpa POPTR_0017s02890 N 0.729
SB01G039330 Sorghum bicolor Sb01g039330 N 0.729
GRMZM2G166780 Zea mays GRMZM2G166780 N 0.729
GRMZM2G157329 Zea mays GRMZM2G157329 N 0.729
LOC_Os11g01020 Oryza sativa LOC_Os11g01020 N 0.714
LOC_Os06g14470 Oryza sativa LOC_Os06g14470 N 0.714
BGIOSIBCE007271 Oryza indica BGIOSIBCE007271 N 0.714
e_gw1.4.224.1 Physcomitrella patens e_gw1.4.224.1 N 0.714
B9GER3_POPTR Populus trichocarpa POPTR_0001s24350 N 0.714
B9NB27_POPTR Populus trichocarpa POPTR_0016s11470 N 0.714
GRMZM2G054468 Zea mays GRMZM2G054468 N 0.714
29005.m000257 Ricinus communis 29005.m000257 N 0.714
XM_002864614.1 Arabidopsis lyrata fgenesh2_kg.8__1946__AT5G59950.1 N 0.714
BGIOSIBCE021374 Oryza indica BGIOSIBCE021374 N 0.714
AT5G59950 Arabidopsis thaliana AT5G59950-TAIR-G N 0.714
BGIOSIBCE007269 Oryza indica BGIOSIBCE007269 N 0.714
BGIOSIBCE010579 Oryza indica BGIOSIBCE010579 N 0.700
cassava6599.valid.m1 Manihot esculenta cassava6599.valid.m1 N 0.700
e_gw1.77.52.1 Physcomitrella patens e_gw1.77.52.1 N 0.700
mgf000319m Mimulus guttatus mgf000319m N 0.700
B9H3A7_POPTR Populus trichocarpa POPTR_0004s08540 N 0.700
LOC_Os03g17010 Oryza sativa LOC_Os03g17010 N 0.700