estExt_Genewise1Plus.C_chr_120306 (Mycosphaerella graminicola)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 estExt_Genewise1Plus.C_chr_120306 T20980_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_Genewise1Plus.C_chr_120306 KH 129 184
estExt_Genewise1Plus.C_chr_120306 KH 234 303

Links

Other KH family RBPs
Other Mycosphaerella graminicola RBPs

36 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ACLA_046540 Aspergillus clavatus CADACLAG00004448 N 0.810
AFLA_112630 Aspergillus flavus CADAFLAG00004997 N 0.786
AFUA_4G07220 Aspergillus fumigatus CADAFUAG00008115 N 0.802
An04g01620 Aspergillus niger CADANGAG00003873 N 0.786
ANIA_04431 Aspergillus nidulans CADANIAG00006023 N 0.786
AO090023000853 Aspergillus oryzae CADAORAG00007942 N 0.786
BC1G_04554 Botrytis cinerea BC1G_04554 N 0.746
BDBG_02628 Blastomyces dermatitidis BDBG_02628 N 0.817
CIMG_04080 Coccidioides immitis CIMG_04080 N 0.746
CPSG_03190 Coccidioides posadasii CPSG_03190 N 0.746
estExt_fgenesh1_pg.C_130006 Neurospora tetrasperma estExt_fgenesh1_pg.C_130006 N 0.802
estExt_fgenesh1_pm.C_70243 Myceliophthora thermophila estExt_fgenesh1_pm.C_70243 N 0.810
estExt_Genewise1.C_21959 Cryphonectria parasitica estExt_Genewise1.C_21959 N 0.817
estExt_Genewise1Plus.C_100691 Neurospora discreta estExt_Genewise1Plus.C_100691 N 0.810
fgenesh1_pm.C_scaffold_12000103 Trichoderma atroviride fgenesh1_pm.C_scaffold_12000103 N 0.754
fgenesh1_pm.C_scaffold_17000077 Mycosphaerella fijiensis fgenesh1_pm.C_scaffold_17000077 N 0.897
fgenesh2_kg.6_#_197_#_798_1_CCPH_CCPI_EXTA Thielavia terrestris fgenesh2_kg.6_#_197_#_798_1_CCPH_CCPI_EXTA N 0.764
FGSG_12899 Fusarium graminearum FGSG_12899 N 0.714
FOXG_08033 Fusarium oxysporum FOXG_08033 N 0.754
FVEG_04953 Fusarium verticillioides FVEG_04953 N 0.738
GLRG_05217 Colletotrichum graminicola GLRG_05217 N 0.780
GSTUMT00003892001 Tuber melanosporum GSTUMT00003892001 N 0.786
gw1.2.55.1 Trichoderma virens gw1.2.55.1 N 0.738
HCAG_05583 Histoplasma capsulatum HCAG_05583 N 0.825
MCYG_01186 Microsporum canis MCYG_01186 N 0.738
MGYG_01738 Microsporum gypseum MGYG_01738 N 0.738
NFIA_109000 Neosartorya fischeri CADNFIAG00009878 N 0.810
PABG_07569 Paracoccidioides brasiliensis PABG_07569 N 0.802
Pa_3_6460 Podospora anserina Pa_3_6460 N 0.803
Pc22g18420 Penicillium chrysogenum Pc22g18420 N 0.786
PMAA_027060 Penicillium marneffei PMAA_027060 N 0.714
SS1G_03925 Sclerotinia sclerotiorum SS1G_03925 N 0.833
TERG_07604 Trichophyton rubrum TERG_07604 N 0.738
TESG_01394 Trichophyton tonsurans TESG_01394 N 0.738
VDAG_01960 Verticillium dahliae VDAG_01960 N 0.754
VDBG_01592 Verticillium albo atrum VDBG_01592 N 0.754