CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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LARP4
(
Choloepus hoffmanni
)
La
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF05383 (La)
IPR006630
ENSCHOG00000010490
T22698_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCHOP00000009289
La
123
180
LKKQIEFCFSRENLSKDLYLISQMDSDQFIPIWTVANMEEIKKLTTDLDLILEVLRXX
Links
Other
La
family RBPs
Other
Choloepus hoffmanni
RBPs
75 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Ame_R013286
Ailuropoda melanoleuca
Ame_R013286
N
0.000
ENSMMUG00000012647
Macaca mulatta
ENSMMUG00000012647
N
0.000
ENSMUSG00000072629
Mus musculus
ENSMUSG00000072629
N
0.000
ENSPPYG00000007296
Pongo pygmaeus
ENSPPYG00000007296
N
0.000
ENSRNOG00000001337
Rattus norvegicus
ENSRNOG00000001337
N
0.000
LOC100415635
Callithrix jacchus
ENSCJAG00000003000
N
0.000
Q4G026_RAT
Rattus norvegicus
ENSRNOG00000019045
N
0.000
SETD1A
Ochotona princeps
ENSOPRG00000016034
N
0.000
SETD1A
Oryctolagus cuniculus
ENSOCUG00000022182
N
0.000
SETD1A
Pan troglodytes
ENSPTRG00000008024
N
0.000
SETD1A
Pteropus vampyrus
ENSPVAG00000011049
N
0.000
SETD1A
Procavia capensis
ENSPCAG00000014351
N
0.000
SETD1A
Tetraodon nigroviridis
ENSTNIG00000014930
N
0.000
setd1a
Xenopus tropicalis
ENSXETG00000001921
N
0.000
SETD1A
Tursiops truncatus
ENSTTRG00000015493
N
0.000
SETD1A
Tarsius syrichta
ENSTSYG00000014425
N
0.000
SETD1A
Takifugu rubripes
ENSTRUG00000008953
N
0.000
SETD1A
Homo sapiens
ENSG00000099381
N
0.000
SETD1A
Tupaia belangeri
ENSTBEG00000009714
N
0.000
SETD1A
Sus scrofa
ENSSSCG00000007782
N
0.000
SETD1A
Sorex araneus
ENSSARG00000005591
N
0.000
SETD1A
Ornithorhynchus anatinus
ENSOANG00000013155
N
0.000
SETD1A
Oryzias latipes
ENSORLG00000002213
N
0.000
SETD1A
Canis familiaris
ENSCAFG00000016758
N
0.000
SETD1A
Cavia porcellus
ENSCPOG00000025456
N
0.000
SETD1A
Echinops telfairi
ENSETEG00000014170
N
0.000
SETD1A
Felis catus
ENSFCAG00000002588
N
0.000
SETD1A
Bos taurus
ENSBTAG00000002345
N
0.000
SETD1A
Gasterosteus aculeatus
ENSGACG00000013688
N
0.000
SETD1A
Gorilla gorilla
ENSGGOG00000016052
N
0.000
SETD1A
Monodelphis domestica
ENSMODG00000001726
N
0.000
SETD1A
Loxodonta africana
ENSLAFG00000023335
N
0.000
SETD1A
Macropus eugenii
ENSMEUG00000003396
N
0.000
Setd1a
Mus musculus
ENSMUSG00000042308
N
0.000
SETD1B
Bos taurus
ENSBTAG00000004172
N
0.000
SETD1B
Canis familiaris
ENSCAFG00000008167
N
0.000
SETD1B
Oryctolagus cuniculus
ENSOCUG00000017708
N
0.000
SETD1B
Equus caballus
ENSECAG00000006549
N
0.000
SETD1B
Gorilla gorilla
ENSGGOG00000006715
N
0.000
SETD1B
Sus scrofa
ENSSSCG00000009806
N
0.000
SETD1B
Loxodonta africana
ENSLAFG00000026518
N
0.000
SETD1B
Callithrix jacchus
ENSCJAG00000016930
N
0.000
SETD1B
Homo sapiens
ENSG00000139718
N
0.000