CIMG_03560 (Coccidioides immitis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 CIMG_03560 T28660_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
CIMG_03560T0 RRM 9 73
CIMG_03560T0 RRM 107 170
CIMG_03560T1 RRM 111 170
CIMG_03560T1 RRM 204 267

Links

Other RRM family RBPs
Other Coccidioides immitis RBPs

32 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
29863.m001059 Ricinus communis 29863.m001059 N 0.000
B9GT89_POPTR Populus trichocarpa POPTR_0002s06660 N 0.000
B9H7U5_POPTR Populus trichocarpa POPTR_0005s21660 N 0.000
BRADI2G24150 Brachypodium distachyon BRADI2G24150 N 0.000
cassava12743.valid.m1 Manihot esculenta cassava12743.valid.m1 N 0.000
cassava19037.valid.m1 Manihot esculenta cassava19037.valid.m1 N 0.000
cassava19038.valid.m1 Manihot esculenta cassava19038.valid.m1 N 0.000
cassava19039.valid.m1 Manihot esculenta cassava19039.valid.m1 N 0.000
cassava19040.valid.m1 Manihot esculenta cassava19040.valid.m1 N 0.000
chr5.CM0052.230.nd Lotus japonicus chr5.CM0052.230.nd N 0.000
Cucsa.365870 Cucumis sativus Cucsa.365870 N 0.000
Glyma02g08870.1 Glycine max Glyma02g08870.1 N 0.000
Glyma10g36770.1 Glycine max Glyma10g36770.1 N 0.000
Glyma20g30820.1 Glycine max Glyma20g30820.1 N 0.000
GRMZM2G052926 Zea mays GRMZM2G052926 N 0.000
GRMZM2G070113 Zea mays GRMZM2G070113 N 0.000
GSVIVG00034558001 Vitis vinifera GSVIVG00034558001 N 0.000
LOC_Os01g64770 Oryza sativa LOC_Os01g64770 N 0.000
LOC_Os05g36120 Oryza sativa LOC_Os05g36120 N 0.000
Medtr1g124970 Medicago truncatula Medtr1g124970 N 0.000
mgf010164m Mimulus guttatus mgf010164m N 0.000
PDK_20s1358001g002 Phoenix dactylifera PDK_20s1358001g002 N 0.000
PK14373.1 Cannabis sativa PK14373.1 N 0.000
ppa005775m Prunus persica ppa005775m N 0.000
PTB3 Arabidopsis thaliana AT1G43190-TAIR-G N 0.000
SB09G021560 Sorghum bicolor Sb09g021560 N 0.000
XM_002893897.1 Arabidopsis lyrata Al_scaffold_0001_3801 N 0.000