BGIOSIBCE021374 (Oryza indica)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 BGIOSIBCE021374 T33006_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
BGIOSIBCE021374 RRM 100 169

Links

Other RRM family RBPs
Other Oryza indica RBPs

32 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
29005.m000257 Ricinus communis 29005.m000257 N 0.743
B9GUT0_POPTR Populus trichocarpa POPTR_0017s02890 N 0.714
B9H3A7_POPTR Populus trichocarpa POPTR_0004s08540 N 0.714
BGIOSIBCE027930 Oryza indica BGIOSIBCE027930 N 0.743
BRADI1G44147 Brachypodium distachyon BRADI1G44147 N 0.957
BRADI3G36320 Brachypodium distachyon BRADI3G36320 N 0.714
cassava30010.valid.m1 Manihot esculenta cassava30010.valid.m1 N 0.729
cassava30011.valid.m1 Manihot esculenta cassava30011.valid.m1 N 0.729
cassava30012.valid.m1 Manihot esculenta cassava30012.valid.m1 N 0.729
cassava35480.valid.m1 Manihot esculenta cassava35480.valid.m1 N 0.700
cassava6245.valid.m1 Manihot esculenta cassava6245.valid.m1 N 0.743
cassava6246.valid.m1 Manihot esculenta cassava6246.valid.m1 N 0.743
cassava9472.m1 Manihot esculenta cassava9472.m1 N 0.743
cassava9473.m1 Manihot esculenta cassava9473.m1 N 0.743
Cucsa.137040 Cucumis sativus Cucsa.137040 N 0.757
Glyma11g33670.1 Glycine max Glyma11g33670.1 N 0.743
Glyma18g04530.1 Glycine max Glyma18g04530.1 N 0.743
GRMZM2G054468 Zea mays GRMZM2G054468 N 0.886
GRMZM2G171921 Zea mays GRMZM2G171921 N 0.757
GSVIVG00030785001 Vitis vinifera GSVIVG00030785001 N 0.743
LOC_Os06g14470 Oryza sativa LOC_Os06g14470 N 1.000
LOC_Os08g33120 Oryza sativa LOC_Os08g33120 N 0.743
MDP0000202749 Malus x domestica MDP0000202749 N 0.757
MDP0000275263 Malus x domestica MDP0000275263 N 0.714
MDP0000299639 Malus x domestica MDP0000299639 N 0.714
Medtr3g087640 Medicago truncatula Medtr3g087640 N 0.743
Medtr3g087650 Medicago truncatula Medtr3g087650 N 0.743
PK16300.1 Cannabis sativa PK16300.1 N 0.743
ppa009623m Prunus persica ppa009623m N 0.757
ppa010358m Prunus persica ppa010358m N 0.700
SB07G020860 Sorghum bicolor Sb07g020860 N 0.757
SB10G009240 Sorghum bicolor Sb10g009240 N 0.914