CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSCAFG00000017759
(
Canis familiaris
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSCAFG00000017759
T35168_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCAFP00000026191
RRM
31
99
LFVGMLNTQQSEDDVRRLVKALRNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGAS
ENSCAFP00000026191
RRM
316
355
DAELMQMFLPFGFVSFDNPASAQTAIQAMNGFQIGMKRLK
Links
Other
RRM
family RBPs
Other
Canis familiaris
RBPs
8 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Cd36_04140
Candida dubliniensis
Cd36_04140
N
0.000
CLUG_01419
Candida lusitaniae
CLUG_01419
N
0.000
CPAG_03658
Candida parapsilosis
CPAG_03658
N
0.000
CTRG_04719
Candida tropicalis
CTRG_04719
N
0.000
estExt_gwp_genewisePlus_human.C_chr_6.11569
Pichia stipitis
estExt_gwp_genewisePlus_human.C_chr_6.11569
N
0.000
LELG_01834
Lodderomyces elongisporus
LELG_01834
N
0.000
NOP4
Candida albicans
orf19.5198
N
0.000
PGUG_04796
Candida guilliermondii
PGUG_04796
N
0.000