CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
ENSCAFG00000017759
(
Canis familiaris
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSCAFG00000017759
T35168_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCAFP00000026191
RRM
31
99
LFVGMLNTQQSEDDVRRLVKALRNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGAS
ENSCAFP00000026191
RRM
316
355
DAELMQMFLPFGFVSFDNPASAQTAIQAMNGFQIGMKRLK
Links
Other
RRM
family RBPs
Other
Canis familiaris
RBPs
8 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CELF4
Sus scrofa
ENSSSCG00000003748
N
0.920
LOC100386457
Callithrix jacchus
ENSCJAG00000021135
I
0.881
CELF4
Oryctolagus cuniculus
ENSOCUG00000024790
I
0.881
CELF4
Tupaia belangeri
ENSTBEG00000010647
I
0.874
Celf4
Mus musculus
ENSMUSG00000024268
I
0.867
CELF4
Monodelphis domestica
ENSMODG00000000306
N
0.847
Brunol4
Rattus norvegicus
ENSRNOG00000014503
I
0.823
CELF6
Takifugu rubripes
ENSTRUG00000012391
I
0.788