CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
CELF4
(
Monodelphis domestica
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSMODG00000000306
T39026_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMODP00000000363
RRM
1
65
MLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGAS
ENSMODP00000000363
RRM
268
316
IYHLPQEFGDAELMQMFLPFGFVSFDNPASAQTAIQAMNGFQIGMKRLK
ENSMODP00000037099
RRM
31
99
LFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGAS
ENSMODP00000037099
RRM
284
320
MIPQQQREGFVSFDNPASAQTAIQAMNGFQIGMKRLK
Links
Other
RRM
family RBPs
Other
Monodelphis domestica
RBPs
10 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Brunol4
Rattus norvegicus
ENSRNOG00000014503
I
1.000
LOC100386457
Callithrix jacchus
ENSCJAG00000021135
I
0.966
CELF4
Oryctolagus cuniculus
ENSOCUG00000024790
I
0.966
CELF4
Tupaia belangeri
ENSTBEG00000010647
I
0.958
Celf4
Mus musculus
ENSMUSG00000024268
I
0.950
CELF4
Sus scrofa
ENSSSCG00000003748
N
0.924
CELF6
Takifugu rubripes
ENSTRUG00000012391
I
0.873
ENSCAFG00000017759
Canis familiaris
ENSCAFG00000017759
N
0.847
CELF4
Loxodonta africana
ENSLAFG00000021352
I
0.700