CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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CELF4
(
Sus scrofa
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSSSCG00000003748
T41408_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSSCP00000004056
RRM
5
73
LFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGAS
ENSSSCP00000004056
RRM
281
324
QEFGDAELMQMFLPFGFVSFDNPASAQTAIQAMNGFQIGMKRLK
Links
Other
RRM
family RBPs
Other
Sus scrofa
RBPs
9 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CELF4
Oryctolagus cuniculus
ENSOCUG00000024790
I
0.958
LOC100386457
Callithrix jacchus
ENSCJAG00000021135
I
0.958
CELF4
Tupaia belangeri
ENSTBEG00000010647
I
0.950
Celf4
Mus musculus
ENSMUSG00000024268
I
0.942
CELF4
Monodelphis domestica
ENSMODG00000000306
N
0.924
ENSCAFG00000017759
Canis familiaris
ENSCAFG00000017759
N
0.920
CELF6
Takifugu rubripes
ENSTRUG00000012391
I
0.864
Brunol4
Rattus norvegicus
ENSRNOG00000014503
I
0.838
CELF4
Loxodonta africana
ENSLAFG00000021352
I
0.702