CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
PABPN1L
(
Myotis lucifugus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSMLUG00000003228
T38637_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMLUP00000002935
RRM
142
210
MYVGNVDYRVTAEELEAYFNICGEVQQVTILCNKFSGHPKGYAYIEFATSSAQAAVGLDKSIFQGRVIK
Links
Other
RRM
family RBPs
Other
Myotis lucifugus
RBPs
19 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
A9PG08_POPTR
Populus trichocarpa
POPTR_0001s35830
N
0.000
B9IF14_POPTR
Populus trichocarpa
POPTR_0015s09810
N
0.000
BGIOSIBCE028840
Oryza indica
BGIOSIBCE028840
N
0.000
BRADI3G42700
Brachypodium distachyon
BRADI3G42700
N
0.000
BRADI4G38260
Brachypodium distachyon
BRADI4G38260
N
0.000
GRMZM2G011129
Zea mays
GRMZM2G011129
N
0.000
GRMZM2G123234
Zea mays
GRMZM2G123234
N
0.000
GSVIVG00007596001
Vitis vinifera
GSVIVG00007596001
N
0.000
GSVIVG00032361001
Vitis vinifera
GSVIVG00032361001
N
0.000
LOC_Os08g44290
Oryza sativa
LOC_Os08g44290
N
0.000
LOC_Os09g39180
Oryza sativa
LOC_Os09g39180
N
0.000
MDP0000218595
Malus x domestica
MDP0000218595
N
0.000
MDP0000528470
Malus x domestica
MDP0000528470
N
0.000
MDP0000919119
Malus x domestica
MDP0000919119
N
0.000
mgf001484m
Mimulus guttatus
mgf001484m
N
0.000
PK05280.1
Cannabis sativa
PK05280.1
N
0.000
ppa008913m
Prunus persica
ppa008913m
N
0.000
ppa009286m
Prunus persica
ppa009286m
N
0.000
SB02G011330
Sorghum bicolor
Sb02g011330
N
0.000
SB07G024400
Sorghum bicolor
Sb07g024400
N
0.000