SB02G011330 (Sorghum bicolor)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Sb02g011330 T45923_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Sb02g011330.1 RRM 118 188
Sb02g011330.1 RRM 212 282

Links

Other RRM family RBPs
Other Sorghum bicolor RBPs

40 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
GRMZM2G011129 Zea mays GRMZM2G011129 N 0.944
LOC_Os09g39180 Oryza sativa LOC_Os09g39180 N 0.937
BRADI4G38260 Brachypodium distachyon BRADI4G38260 N 0.915
LOC_Os08g44290 Oryza sativa LOC_Os08g44290 N 0.838
BGIOSIBCE028840 Oryza indica BGIOSIBCE028840 N 0.838
cassava30233.valid.m1 Manihot esculenta cassava30233.valid.m1 N 0.831
GRMZM2G123234 Zea mays GRMZM2G123234 N 0.824
GSVIVG00032361001 Vitis vinifera GSVIVG00032361001 N 0.817
SB07G024400 Sorghum bicolor Sb07g024400 N 0.817
ppa008913m Prunus persica ppa008913m N 0.817
PK05280.1 Cannabis sativa PK05280.1 N 0.817
BRADI3G42700 Brachypodium distachyon BRADI3G42700 N 0.817
GSVIVG00007596001 Vitis vinifera GSVIVG00007596001 N 0.810
cassava511.valid.m1 Manihot esculenta cassava511.valid.m1 N 0.810
30147.m013835 Ricinus communis 30147.m013835 N 0.810
B9I3I8_POPTR Populus trichocarpa POPTR_0012s09200 N 0.803
MDP0000218595 Malus x domestica MDP0000218595 N 0.803
A9PG08_POPTR Populus trichocarpa POPTR_0001s35830 N 0.803
ppa009286m Prunus persica ppa009286m N 0.803
MDP0000919119 Malus x domestica MDP0000919119 N 0.796
GRMZM2G158462 Zea mays GRMZM2G158462 N 0.796
mgf008267m Mimulus guttatus mgf008267m N 0.789
mgf001484m Mimulus guttatus mgf001484m N 0.789
XM_002865734.1 Arabidopsis lyrata scaffold_801433.1 N 0.782
Cucsa.196330 Cucumis sativus Cucsa.196330 N 0.782
cassava512.valid.m1 Manihot esculenta cassava512.valid.m1 N 0.775
XM_002867599.1 Arabidopsis lyrata fgenesh2_kg.7__1798__AT4G24770.1 N 0.775
Glyma05g02800.1 Glycine max Glyma05g02800.1 N 0.768
Glyma17g13470.1 Glycine max Glyma17g13470.1 N 0.768
MDP0000528470 Malus x domestica MDP0000528470 N 0.768
ATRBP31 Arabidopsis thaliana AT4G24770-TAIR-G N 0.754
mgf009747m Mimulus guttatus mgf009747m N 0.754
Glyma06g18470.1 Glycine max Glyma06g18470.1 N 0.754
B9IF14_POPTR Populus trichocarpa POPTR_0015s09810 N 0.754
MDP0000296631 Malus x domestica MDP0000296631 N 0.746
MDP0000299693 Malus x domestica MDP0000299693 N 0.746
Glyma04g36420.1 Glycine max Glyma04g36420.1 N 0.732
CP31B Arabidopsis thaliana AT5G50250-TAIR-G N 0.732
PK28733.1 Cannabis sativa PK28733.1 N 0.725
MDP0000224531 Malus x domestica MDP0000224531 N 0.711