BRADI3G42700 (Brachypodium distachyon)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 BRADI3G42700 T33256_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
BRADI3G42700.1 RRM 110 180
BRADI3G42700.1 RRM 204 274

Links

Other RRM family RBPs
Other Brachypodium distachyon RBPs

25 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
SB07G024400 Sorghum bicolor Sb07g024400 N 0.944
GRMZM2G158462 Zea mays GRMZM2G158462 N 0.930
BGIOSIBCE028840 Oryza indica BGIOSIBCE028840 N 0.915
LOC_Os08g44290 Oryza sativa LOC_Os08g44290 N 0.915
GRMZM2G123234 Zea mays GRMZM2G123234 N 0.908
GRMZM2G011129 Zea mays GRMZM2G011129 N 0.845
BRADI4G38260 Brachypodium distachyon BRADI4G38260 N 0.838
LOC_Os09g39180 Oryza sativa LOC_Os09g39180 N 0.817
SB02G011330 Sorghum bicolor Sb02g011330 N 0.817
ppa008913m Prunus persica ppa008913m N 0.754
A9PG08_POPTR Populus trichocarpa POPTR_0001s35830 N 0.754
GSVIVG00032361001 Vitis vinifera GSVIVG00032361001 N 0.746
PK05280.1 Cannabis sativa PK05280.1 N 0.746
MDP0000218595 Malus x domestica MDP0000218595 N 0.739
mgf001484m Mimulus guttatus mgf001484m N 0.739
MDP0000919119 Malus x domestica MDP0000919119 N 0.739
GSVIVG00007596001 Vitis vinifera GSVIVG00007596001 N 0.725
B9IF14_POPTR Populus trichocarpa POPTR_0015s09810 N 0.725
ppa009286m Prunus persica ppa009286m N 0.725
mgf008267m Mimulus guttatus mgf008267m N 0.711
MDP0000528470 Malus x domestica MDP0000528470 N 0.711
cassava511.valid.m1 Manihot esculenta cassava511.valid.m1 N 0.704
XM_002867599.1 Arabidopsis lyrata fgenesh2_kg.7__1798__AT4G24770.1 N 0.704
B9I3I8_POPTR Populus trichocarpa POPTR_0012s09200 N 0.704
cassava30233.valid.m1 Manihot esculenta cassava30233.valid.m1 N 0.704