GRMZM2G123234 (Zea mays)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 GRMZM2G123234 T54127_0.6 MaizeSequence (2009-Oct-16)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
GRMZM2G123234_P01 RRM 110 180
GRMZM2G123234_P01 RRM 204 274
GRMZM2G123234_P02 RRM 1 25
GRMZM2G123234_P02 RRM 49 119

Links

Other RRM family RBPs
Other Zea mays RBPs

35 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
SB07G024400 Sorghum bicolor Sb07g024400 N 0.937
LOC_Os08g44290 Oryza sativa LOC_Os08g44290 N 0.915
GRMZM2G158462 Zea mays GRMZM2G158462 N 0.915
BGIOSIBCE028840 Oryza indica BGIOSIBCE028840 N 0.915
BRADI3G42700 Brachypodium distachyon BRADI3G42700 N 0.908
GRMZM2G011129 Zea mays GRMZM2G011129 N 0.852
BRADI4G38260 Brachypodium distachyon BRADI4G38260 N 0.831
SB02G011330 Sorghum bicolor Sb02g011330 N 0.824
LOC_Os09g39180 Oryza sativa LOC_Os09g39180 N 0.824
ppa008913m Prunus persica ppa008913m N 0.782
A9PG08_POPTR Populus trichocarpa POPTR_0001s35830 N 0.775
MDP0000218595 Malus x domestica MDP0000218595 N 0.775
GSVIVG00032361001 Vitis vinifera GSVIVG00032361001 N 0.775
PK05280.1 Cannabis sativa PK05280.1 N 0.768
mgf001484m Mimulus guttatus mgf001484m N 0.761
MDP0000919119 Malus x domestica MDP0000919119 N 0.754
ppa009286m Prunus persica ppa009286m N 0.754
B9IF14_POPTR Populus trichocarpa POPTR_0015s09810 N 0.746
MDP0000528470 Malus x domestica MDP0000528470 N 0.746
GSVIVG00007596001 Vitis vinifera GSVIVG00007596001 N 0.739
cassava30233.valid.m1 Manihot esculenta cassava30233.valid.m1 N 0.739
30147.m013835 Ricinus communis 30147.m013835 N 0.732
mgf008267m Mimulus guttatus mgf008267m N 0.732
B9I3I8_POPTR Populus trichocarpa POPTR_0012s09200 N 0.732
mgf009747m Mimulus guttatus mgf009747m N 0.725
cassava511.valid.m1 Manihot esculenta cassava511.valid.m1 N 0.725
XM_002867599.1 Arabidopsis lyrata fgenesh2_kg.7__1798__AT4G24770.1 N 0.725
Glyma05g02800.1 Glycine max Glyma05g02800.1 N 0.718
Cucsa.196330 Cucumis sativus Cucsa.196330 N 0.718
ATRBP31 Arabidopsis thaliana AT4G24770-TAIR-G N 0.718
XM_002865734.1 Arabidopsis lyrata scaffold_801433.1 N 0.718
MDP0000299693 Malus x domestica MDP0000299693 N 0.711
MDP0000296631 Malus x domestica MDP0000296631 N 0.711
Glyma06g18470.1 Glycine max Glyma06g18470.1 N 0.711
Glyma17g13470.1 Glycine max Glyma17g13470.1 N 0.711