ppa008913m (Prunus persica)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ppa008913m T58399_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ppa008913m RRM 135 205
ppa008913m RRM 229 299

Links

Other RRM family RBPs
Other Prunus persica RBPs

39 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
MDP0000218595 Malus x domestica MDP0000218595 N 0.944
MDP0000919119 Malus x domestica MDP0000919119 N 0.923
MDP0000528470 Malus x domestica MDP0000528470 N 0.894
PK05280.1 Cannabis sativa PK05280.1 N 0.887
GSVIVG00032361001 Vitis vinifera GSVIVG00032361001 N 0.859
mgf001484m Mimulus guttatus mgf001484m N 0.852
GRMZM2G011129 Zea mays GRMZM2G011129 N 0.845
BRADI4G38260 Brachypodium distachyon BRADI4G38260 N 0.831
A9PG08_POPTR Populus trichocarpa POPTR_0001s35830 N 0.824
cassava30233.valid.m1 Manihot esculenta cassava30233.valid.m1 N 0.824
cassava511.valid.m1 Manihot esculenta cassava511.valid.m1 N 0.824
LOC_Os09g39180 Oryza sativa LOC_Os09g39180 N 0.817
SB02G011330 Sorghum bicolor Sb02g011330 N 0.817
ppa009286m Prunus persica ppa009286m N 0.810
30147.m013835 Ricinus communis 30147.m013835 N 0.810
GSVIVG00007596001 Vitis vinifera GSVIVG00007596001 N 0.810
Cucsa.196330 Cucumis sativus Cucsa.196330 N 0.803
mgf008267m Mimulus guttatus mgf008267m N 0.803
B9I3I8_POPTR Populus trichocarpa POPTR_0012s09200 N 0.803
XM_002867599.1 Arabidopsis lyrata fgenesh2_kg.7__1798__AT4G24770.1 N 0.796
Glyma06g18470.1 Glycine max Glyma06g18470.1 N 0.796
cassava512.valid.m1 Manihot esculenta cassava512.valid.m1 N 0.789
XM_002865734.1 Arabidopsis lyrata scaffold_801433.1 N 0.789
GRMZM2G123234 Zea mays GRMZM2G123234 N 0.782
B9IF14_POPTR Populus trichocarpa POPTR_0015s09810 N 0.775
Glyma04g36420.1 Glycine max Glyma04g36420.1 N 0.775
mgf009747m Mimulus guttatus mgf009747m N 0.775
SB07G024400 Sorghum bicolor Sb07g024400 N 0.768
Glyma17g13470.1 Glycine max Glyma17g13470.1 N 0.768
BGIOSIBCE028840 Oryza indica BGIOSIBCE028840 N 0.761
LOC_Os08g44290 Oryza sativa LOC_Os08g44290 N 0.761
PK28733.1 Cannabis sativa PK28733.1 N 0.754
BRADI3G42700 Brachypodium distachyon BRADI3G42700 N 0.754
Glyma05g02800.1 Glycine max Glyma05g02800.1 N 0.754
ATRBP31 Arabidopsis thaliana AT4G24770-TAIR-G N 0.754
GRMZM2G158462 Zea mays GRMZM2G158462 N 0.746
CP31B Arabidopsis thaliana AT5G50250-TAIR-G N 0.746
MDP0000296631 Malus x domestica MDP0000296631 N 0.732
MDP0000299693 Malus x domestica MDP0000299693 N 0.732