CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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CELF4
(
Tupaia belangeri
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSTBEG00000010647
T41766_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
bru-3
M117_0.6
Drosophila melanogaster
KUGKUGU
RNAcompete
Ray et al.(2013)
RNCMPT00122
0.729
For this family, RBPs with RBD identity >
0.7
will likely have a similar motif
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTBEP00000009213
RRM
87
155
LFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGAS
ENSTBEP00000009213
RRM
357
406
FIYHLPQEFGDAELMQMFLPFGFVSFDNPASAQTAIQAMNGFQIGMKRLK
Links
Other
RRM
family RBPs
Other
Tupaia belangeri
RBPs
9 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ENSCHOG00000003841
Choloepus hoffmanni
ENSCHOG00000003841
I
0.000
HNRNPH1
Felis catus
ENSFCAG00000001204
I
0.000
HNRNPH1
Sorex araneus
ENSSARG00000003024
I
0.000
HNRNPH1
Taeniopygia guttata
ENSTGUG00000001085
I
0.000
HNRNPH1
Tarsius syrichta
ENSTSYG00000006417
I
0.000
HNRNPH1
Tursiops truncatus
ENSTTRG00000000470
I
0.000
LOC100067495
Equus caballus
ENSECAG00000014429
I
0.000