170286 (Helobdella robusta)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 170286 T48553_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
TARDBP
M074_0.6 		Homo sapiens GAAUGD RNAcompete
Ray et al.(2013)
RNCMPT00076 		0.707
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
170286 RRM 110 177
170286 RRM 197 250

Links

Other RRM family RBPs
Other Helobdella robusta RBPs

38 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AGAP003497 Anopheles gambiae AGAP003497 N 0.713
amel4_ncbi_hmm11035 Apis mellifera amel4_ncbi_hmm11035 I 0.726
Ame_R011012 Ailuropoda melanoleuca Ame_R011012 I 0.702
CPIJ014288 Culex quinquefasciatus CPIJ014288 N 0.746
CpipJ_CPIJ014288 Culex pipiens CpipJ_CPIJ014288 N 0.746
ENSACAG00000011709 Anolis carolinensis ENSACAG00000011709 I 0.710
ENSCAFG00000016759 Canis familiaris ENSCAFG00000016759 I 0.702
estExt_Genewise1Plus.C_8190002 Capitella teleta estExt_Genewise1Plus.C_8190002 I 0.754
e_gw1.17.468.1 Lottia gigantea e_gw1.17.468.1 I 0.728
fgenesh1_pg.C_scaffold_6000249 Daphnia pulex fgenesh1_pg.C_scaffold_6000249 N 0.700
GA10247-RA Drosophila pseudoobscura FBgn0070305 I 0.702
GD25005 Drosophila simulans FBgn0196318 I 0.702
GE11522 Drosophila yakuba FBgn0229324 I 0.710
GG19989 Drosophila erecta FBgn0112189 I 0.710
GJ21868 Drosophila virilis FBgn0208985 I 0.702
GK15864 Drosophila willistoni FBgn0217867 I 0.702
GL10927 Drosophila persimilis FBgn0148537 I 0.702
GM15502 Drosophila sechellia FBgn0170420 I 0.702
LOC100014246 Monodelphis domestica ENSMODG00000011233 I 0.702
LOC100051482 Equus caballus ENSECAG00000008338 I 0.702
nasonia_NCBI_hmm274594 Nasonia vitripennis nasonia_NCBI_hmm274594 I 0.718
PHUM575260 Pediculus humanus PHUM575260 I 0.714
Q2KJ45_BOVIN Bos taurus ENSBTAG00000003697 I 0.702
TADBP_CHICK Gallus gallus ENSGALG00000002906 I 0.702
TARDBP Tupaia belangeri ENSTBEG00000000263 I 0.702
TARDBP Cavia porcellus ENSCPOG00000011619 I 0.702
TARDBP Erinaceus europaeus ENSEEUG00000003755 I 0.702
TARDBP Echinops telfairi ENSETEG00000004358 I 0.702
TARDBP Loxodonta africana ENSLAFG00000014421 I 0.702
TARDBP Macropus eugenii ENSMEUG00000006548 I 0.702
TARDBP Meleagris gallopavo ENSMGAG00000004637 I 0.702
TARDBP Ornithorhynchus anatinus ENSOANG00000013320 I 0.702
TARDBP Ochotona princeps ENSOPRG00000006352 I 0.702
TARDBP Taeniopygia guttata ENSTGUG00000003255 I 0.710
TARDBP Tursiops truncatus ENSTTRG00000001312 I 0.702
TARDBP Vicugna pacos ENSVPAG00000009543 I 0.702
tardbp Xenopus tropicalis ENSXETG00000006317 I 0.718
TBPH Drosophila melanogaster FBgn0025790 I 0.702