Glyma09g17080.1 (Glycine max)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Glyma09g17080.1 T52747_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Glyma09g17080.1 RRM 56 126

Links

Other RRM family RBPs
Other Glycine max RBPs

22 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
29428.m000321 Ricinus communis 29428.m000321 N 0.831
B9HW06_POPTR Populus trichocarpa POPTR_0010s24120 N 0.817
BRADI3G35650 Brachypodium distachyon BRADI3G35650 N 0.732
cassava18017.valid.m1 Manihot esculenta cassava18017.valid.m1 N 0.775
CC1G_06273 Coprinopsis cinerea CC1G_06273 N 0.704
Cucsa.364800 Cucumis sativus Cucsa.364800 N 0.817
e_gw1.10.335.1 Mucor circinelloides e_gw1.10.335.1 N 0.746
e_gw1.35.197.1 Physcomitrella patens e_gw1.35.197.1 N 0.704
Glyma02g29190.1 Glycine max Glyma02g29190.1 N 1.000
GRMZM2G056350 Zea mays GRMZM2G056350 N 0.732
GSVIVG00021851001 Vitis vinifera GSVIVG00021851001 N 0.831
gw1.198.122.1 Physcomitrella patens gw1.198.122.1 N 0.746
LOC_Os08g31810 Oryza sativa LOC_Os08g31810 N 0.775
MDP0000340057 Malus x domestica MDP0000340057 N 0.859
Medtr1g137330 Medicago truncatula Medtr1g137330 N 0.944
Medtr8g129780 Medicago truncatula Medtr8g129780 N 0.930
mgf009918m Mimulus guttatus mgf009918m N 0.746
PK02111.1 Cannabis sativa PK02111.1 N 0.817
ppa025985m Prunus persica ppa025985m N 0.873
RO3G_08088 Rhizopus oryzae RO3G_08088 N 0.732
Sb03g045720 Sorghum bicolor Sb03g045720 N 0.775
SOCG_03680 Schizosaccharomyces octosporus SOCG_03680 N 0.704