SOCG_03680 (Schizosaccharomyces octosporus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 SOCG_03680 T30704_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
SOCG_03680T0 RRM 93 163

Links

Other RRM family RBPs
Other Schizosaccharomyces octosporus RBPs

19 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
SPCC1827.05c Schizosaccharomyces pombe SPCC1827.05c N 0.817
UM03939 Ustilago maydis UM03939 N 0.746
e_gw1.10.335.1 Mucor circinelloides e_gw1.10.335.1 N 0.746
EDP41651.1 Malassezia globosa EDP41651.1 N 0.746
estExt_fgenesh2_kg.C_71062 Serpula lacrymans estExt_fgenesh2_kg.C_71062 N 0.732
gw1.198.122.1 Physcomitrella patens gw1.198.122.1 N 0.732
estExt_Genewise1Plus.C_30445 Agaricus bisporus estExt_Genewise1Plus.C_30445 N 0.732
fgenesh1_pm.00609_#_590 Aspergillus carbonarius fgenesh1_pm.00609_#_590 N 0.718
e_gw1.35.197.1 Physcomitrella patens e_gw1.35.197.1 N 0.718
CC1G_06273 Coprinopsis cinerea CC1G_06273 N 0.704
Medtr1g137330 Medicago truncatula Medtr1g137330 N 0.704
PMAA_027560 Penicillium marneffei PMAA_027560 N 0.704
Glyma02g29190.1 Glycine max Glyma02g29190.1 N 0.704
augustus-scaffold_1.g441 Schizophyllum commune augustus-scaffold_1.g441 N 0.704
MKI67IP Microcebus murinus ENSMICG00000015787 N 0.704
e_gw1.1.503.1 Phycomyces blakesleeanus e_gw1.1.503.1 N 0.704
estExt_fgenesh2_pg.C_120136 Selaginella moellendorfii estExt_fgenesh2_pg.C_120136 N 0.704
fgenesh1_pg.C_scaffold_4000265 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_4000265 N 0.704
Glyma09g17080.1 Glycine max Glyma09g17080.1 N 0.704