Medtr8g077770 (Medicago truncatula)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Medtr8g077770 T54604_0.6 PlantGDB (2010-Oct-15)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Medtr8g077770.1 RRM 6 72

Links

Other RRM family RBPs
Other Medicago truncatula RBPs

37 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
29682.m000595 Ricinus communis 29682.m000595 N 0.791
30073.m002271 Ricinus communis 30073.m002271 N 0.791
A9PE83_POPTR Populus trichocarpa POPTR_0001s02090 N 0.851
AT4G17720 Arabidopsis thaliana AT4G17720-TAIR-G N 0.735
AT5G46870 Arabidopsis thaliana AT5G46870-TAIR-G N 0.701
B9GZI4_POPTR Populus trichocarpa POPTR_0003s09410 N 0.821
BGIOSIBCE012743 Oryza indica BGIOSIBCE012743 N 0.710
BGIOSIBCE016670 Oryza indica BGIOSIBCE016670 N 0.716
BGIOSIBCE020376 Oryza indica BGIOSIBCE020376 N 0.806
BRADI1G51740 Brachypodium distachyon BRADI1G51740 N 0.806
cassava25244.valid.m1 Manihot esculenta cassava25244.valid.m1 N 0.739
cassava25245.valid.m1 Manihot esculenta cassava25245.valid.m1 N 0.750
Cucsa.322000 Cucumis sativus Cucsa.322000 N 0.783
Glyma01g01950.1 Glycine max Glyma01g01950.1 N 0.739
Glyma09g33960.1 Glycine max Glyma09g33960.1 N 0.783
GRMZM2G051890 Zea mays GRMZM2G051890 N 0.776
GRMZM2G102808 Zea mays GRMZM2G102808 N 0.806
GRMZM2G114789 Zea mays GRMZM2G114789 N 0.701
GSVIVG00013098001 Vitis vinifera GSVIVG00013098001 N 0.821
GSVIVG00024381001 Vitis vinifera GSVIVG00024381001 N 0.836
LOC_Os03g50560 Oryza sativa LOC_Os03g50560 N 0.710
LOC_Os04g53330 Oryza sativa LOC_Os04g53330 N 0.716
LOC_Os06g02240 Oryza sativa LOC_Os06g02240 N 0.806
MDP0000177505 Malus x domestica MDP0000177505 N 0.746
MDP0000243576 Malus x domestica MDP0000243576 N 0.701
MDP0000596287 Malus x domestica MDP0000596287 N 0.806
Medtr5g029540 Medicago truncatula Medtr5g029540 N 0.791
mgf007506m Mimulus guttatus mgf007506m N 0.806
mgf014593m Mimulus guttatus mgf014593m N 0.746
PDK_20s1330821g002 Phoenix dactylifera PDK_20s1330821g002 N 0.701
PDK_20s1346002g005 Phoenix dactylifera PDK_20s1346002g005 N 0.791
PDK_20s1613681g001 Phoenix dactylifera PDK_20s1613681g001 N 0.806
PK05006.1 Cannabis sativa PK05006.1 N 0.821
ppa024222m Prunus persica ppa024222m N 0.731
SB10G000940 Sorghum bicolor Sb10g000940 N 0.791
XM_002865109.1 Arabidopsis lyrata Al_scaffold_0008_128 N 0.701
XM_002867996.1 Arabidopsis lyrata fgenesh2_kg.7__2538__AT4G17720.1 N 0.735