gw1.12.00.150.1 (Ostreococcus tauri)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 gw1.12.00.150.1 T56987_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
gw1.12.00.150.1 RRM 246 316

Links

Other RRM family RBPs
Other Ostreococcus tauri RBPs

139 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
83285 Helobdella robusta 83285 N 0.704
A6QP53_BOVIN Bos taurus ENSBTAG00000016980 N 0.761
AAEL005541 Aedes aegypti AAEL005541 N 0.718
AAEL005690 Aedes aegypti AAEL005690 N 0.718
AB03196.1 Alternaria brassicicola AB03196.1 N 0.704
AGAP008136 Anopheles gambiae AGAP008136 N 0.732
amel4_ncbi_hmm11961 Apis mellifera amel4_ncbi_hmm11961 N 0.732
amel4_ncbi_hmm35613 Apis mellifera amel4_ncbi_hmm35613 N 0.732
Ame_R008665 Ailuropoda melanoleuca Ame_R008665 N 0.761
ANIA_09095 Aspergillus nidulans CADANIAG00009519 N 0.718
Aqu1.223583 Amphimedon queenslandica Aqu1.223583 N 0.732
ARB_04672 Arthroderma benhamiae ARB_04672 N 0.704
BC1G_10007 Botrytis cinerea BC1G_10007 N 0.718
BGIBMGA008977 Bombyx mori BGIBMGA008977 N 0.746
CG5808 Drosophila melanogaster FBgn0027617 N 0.761
CHGG_06839 Chaetomium globosum CHGG_06839 N 0.746
CNBG_1409 Cryptococcus neoformans CNBG_1409 N 0.718
CPIJ000912 Culex quinquefasciatus CPIJ000912 N 0.718
CpipJ_CPIJ000912 Culex pipiens CpipJ_CPIJ000912 N 0.718
cyp6 Schizosaccharomyces pombe SPBC17G9.05 N 0.704
DGIL_AUG5s502g5t1 Acyrtosiphon pisum DGIL_AUG5s502g5t1 N 0.704
EAT81165.2 Phaeosphaeria nodorum EAT81165.2 N 0.718
EDO07903.1 Babesia bovis EDO07903.1 N 0.704
ENSCING00000006773 Ciona intestinalis ENSCING00000006773 I 0.746
ENSCSAVG00000010619 Ciona savignyi ENSCSAVG00000010619 N 0.746
ENSOANG00000001063 Ornithorhynchus anatinus ENSOANG00000001063 N 0.775
estExt_fgenesh1_kg.C_170006 Cochliobolus heterostrophus C5 estExt_fgenesh1_kg.C_170006 N 0.704
estExt_fgenesh1_kg.C_40083 Melampsora laricis populina estExt_fgenesh1_kg.C_40083 N 0.704
estExt_fgenesh2_kg.C_140159 Agaricus bisporus estExt_fgenesh2_kg.C_140159 N 0.718
estExt_fgenesh2_pm.C_1170007 Branchiostoma floridae estExt_fgenesh2_pm.C_1170007 N 0.732
estExt_fgenesh3_pg.C_910016 Postia placenta estExt_fgenesh3_pg.C_910016 N 0.718
estExt_fgeneshCV_pg.C_40316 Chlorella vulgaris estExt_fgeneshCV_pg.C_40316 N 0.704
estExt_Genewise1.C_180101 Capitella teleta estExt_Genewise1.C_180101 N 0.718
estExt_Genewise1.C_23809 Thielavia terrestris estExt_Genewise1.C_23809 N 0.704
estExt_Genewise1.C_30053 Myceliophthora thermophila estExt_Genewise1.C_30053 N 0.761
estExt_Genewise1Plus.C_11662 Tremella mesenterica estExt_Genewise1Plus.C_11662 N 0.732
estExt_Genewise1Plus.C_12820 Neurospora discreta estExt_Genewise1Plus.C_12820 N 0.761
estExt_Genewise1Plus.C_40228 Batrachochytrium dendrobatidis estExt_Genewise1Plus.C_40228 N 0.718
estExt_Genewise1Plus.C_40585 Mucor circinelloides estExt_Genewise1Plus.C_40585 N 0.718
estExt_Genewise1Plus.C_61472 Cryphonectria parasitica estExt_Genewise1Plus.C_61472 N 0.718
estExt_Genewise1Plus.C_chr_40303 Mycosphaerella graminicola estExt_Genewise1Plus.C_chr_40303 N 0.718
estExt_GeneWisePlus.C_270056 Trichoderma reesei estExt_GeneWisePlus.C_270056 N 0.704
EuGene.1200010297 Ostreococcus RCC809 EuGene.1200010297 N 0.915
e_gw.42.57.1 Nematostella vectensis e_gw.42.57.1 N 0.789
e_gw1.11.236.1 Trichoderma atroviride e_gw1.11.236.1 N 0.718
e_gw1.4.2113.1 Pleurotus ostreatus e_gw1.4.2113.1 N 0.746
e_gw1.4.423.1 Coccomyxa C 169 e_gw1.4.423.1 N 0.704
e_gw1.6.1078.1 Selaginella moellendorfii e_gw1.6.1078.1 N 0.761
e_gw1.6.80.1 Monosiga brevicollis e_gw1.6.80.1 N 0.732
e_gww1.4.788.1 Laccaria bicolor e_gww1.4.788.1 N 0.704
e_gww2.22.65.1 Phanerochaete chrysosporium e_gww2.22.65.1 N 0.704
fgenesh1_pm.C_scaffold_1000049 Schizophyllum commune fgenesh1_pm.C_scaffold_1000049 N 0.732
fgenesh1_pm.C_scaffold_3000471 Trichoderma virens fgenesh1_pm.C_scaffold_3000471 N 0.704
fgenesh1_pm.C_scaffold_9000117 Mycosphaerella fijiensis fgenesh1_pm.C_scaffold_9000117 N 0.704
fgenesh1_pm.sca_11_chr8_3_0000173 Nectria haematococca fgenesh1_pm.sca_11_chr8_3_0000173 N 0.732
fgenesh3_kg.4__300__1748_1_CCOZ_CCPA_CCPB_CCPC_EXTA Heterobasidion annosum fgenesh3_kg.4__300__1748_1_CCOZ_CCPA_CCPB_CCPC_EXTA N 0.718
fgeneshTA2_pg.C_scaffold_8000290 Trichoplax adhaerens fgeneshTA2_pg.C_scaffold_8000290 N 0.732
FGSG_04479 Fusarium graminearum FGSG_04479 N 0.732
FOXG_13736 Fusarium oxysporum FOXG_13736 N 0.746
FVEG_11166 Fusarium verticillioides FVEG_11166 N 0.746
GA26948-RA Drosophila pseudoobscura FBgn0248319 N 0.789
GD18267 Drosophila simulans FBgn0189800 N 0.761
GE10772 Drosophila yakuba FBgn0228614 N 0.761
GF18772 Drosophila ananassae FBgn0095789 N 0.789
GG12319 Drosophila erecta FBgn0104609 N 0.761
GH18460 Drosophila grimshawi FBgn0125927 N 0.789
GI24038 Drosophila mojavensis FBgn0146761 N 0.789
GJ23668 Drosophila virilis FBgn0210765 N 0.789
GK13166 Drosophila willistoni FBgn0215175 N 0.746
GL13859 Drosophila persimilis FBgn0151464 N 0.789
GLRG_06614 Colletotrichum graminicola GLRG_06614 N 0.704
GM23461 Drosophila sechellia FBgn0178328 N 0.761
gw1.1.256.1 Neurospora tetrasperma gw1.1.256.1 N 0.761
gw1.13.70.1 Lottia gigantea gw1.13.70.1 N 0.732
gwEuk.12.143.1 Ostreococcus lucimarinus gwEuk.12.143.1 N 0.958
gwH.33.76.1 Chlamydomonas reinhardtii gwH.33.76.1 N 0.704
LOAG_08216 Loa loa LOAG_08216 N 0.789
MCYG_06073 Microsporum canis MCYG_06073 N 0.718
MGG_10681 Magnaporthe oryzae MGG_10681 N 0.732
MGYG_05886 Microsporum gypseum MGYG_05886 N 0.718
nasonia_NCBI_hmm783174 Nasonia vitripennis nasonia_NCBI_hmm783174 N 0.718
NCU10166 Neurospora crassa NCU10166 N 0.761
Pa_2_13850 Podospora anserina Pa_2_13850 N 0.761
PGTG_10482 Puccinia graminis PGTG_10482 N 0.704
PGTG_14680 Puccinia graminis PGTG_14680 N 0.704
PHUM268300 Pediculus humanus PHUM268300 N 0.732
PierreAnnot2.00074 Micromonas pusilla PierreAnnot2.00074 N 0.831
PMAA_010740 Penicillium marneffei PMAA_010740 N 0.704
PPIL4 Takifugu rubripes ENSTRUG00000006670 N 0.775
PPIL4 Vicugna pacos ENSVPAG00000005157 N 0.761
PPIL4 Sorex araneus ENSSARG00000011244 N 0.761
Ppil4 Rattus norvegicus ENSRNOG00000015552 N 0.761
PPIL4 Pteropus vampyrus ENSPVAG00000000746 N 0.761
PPIL4 Gasterosteus aculeatus ENSGACG00000006639 N 0.732
PPIL4 Procavia capensis ENSPCAG00000008203 N 0.761
PPIL4 Oryzias latipes ENSORLG00000015310 N 0.746
PPIL4 Ochotona princeps ENSOPRG00000005619 N 0.761
PPIL4 Otolemur garnettii ENSOGAG00000014153 N 0.761
PPIL4 Gallus gallus ENSGALG00000012364 N 0.775
PPIL4 Gorilla gorilla ENSGGOG00000009686 N 0.761
Ppil4 Mus musculus ENSMUSG00000015757 N 0.761
PPIL4 Monodelphis domestica ENSMODG00000016825 N 0.761
PPIL4 Macaca mulatta ENSMMUG00000023067 N 0.761
PPIL4 Microcebus murinus ENSMICG00000006287 N 0.761
PPIL4 Spermophilus tridecemlineatus ENSSTOG00000013980 N 0.732
PPIL4 Taeniopygia guttata ENSTGUG00000010655 N 0.761
PPIL4 Meleagris gallopavo ENSMGAG00000012596 N 0.775
PPIL4 Pan troglodytes ENSPTRG00000018692 N 0.761
PPIL4 Myotis lucifugus ENSMLUG00000002766 N 0.761
PPIL4 Cavia porcellus ENSCPOG00000014614 N 0.761
ppil4 Xenopus tropicalis ENSXETG00000021385 N 0.761
PPIL4 Oryctolagus cuniculus ENSOCUG00000007696 N 0.761
PPIL4 Anolis carolinensis ENSACAG00000006936 N 0.761
ppil4 Danio rerio ENSDARG00000043854 N 0.746
PPIL4 Equus caballus ENSECAG00000021819 N 0.761
PPIL4 Erinaceus europaeus ENSEEUG00000000959 N 0.775
PPIL4 Callithrix jacchus ENSCJAG00000019613 N 0.736
PPIL4 Homo sapiens ENSG00000131013 N 0.761
PPIL4 Tursiops truncatus ENSTTRG00000006014 N 0.761
PPIL4 Tetraodon nigroviridis ENSTNIG00000002706 N 0.775
PPIL4 Loxodonta africana ENSLAFG00000026804 N 0.761
PTRG_04608 Pyrenophora tritici repentis PTRG_04608 N 0.718
PTSG_07932 Salpingoeca rosetta PTSG_07932 N 0.704
Q6JDI1_CANFA Canis familiaris ENSCAFG00000000379 N 0.761
RO3G_06974 Rhizopus oryzae RO3G_06974 N 0.718
Sjc_0091550 Schistosoma japonicum Sjc_0091550 N 0.718
Smp_165540 Schistosoma mansoni Smp_165540 N 0.704
SNOG_11457 Stagonospora nodorum SNOG_11457 N 0.718
SPPG_03169 Spizellomyces punctatus SPPG_03169 N 0.718
TEQG_07016 Trichophyton equinum TEQG_07016 N 0.704
TERG_06028 Trichophyton rubrum TERG_06028 N 0.704
TRV_03115 Trichophyton verrucosum TRV_03115 N 0.704
VDAG_02606 Verticillium dahliae VDAG_02606 N 0.704
VDBG_02138 Verticillium albo atrum VDBG_02138 N 0.704
WUBG_04730 Wuchereria bancrofti WUBG_04730 N 0.775
XP_001180629.1 Strongylocentrotus purpuratus XP_001180629.1 N 0.718
XP_001192414.1 Strongylocentrotus purpuratus XP_001192414.1 N 0.718
XP_782627.2 Strongylocentrotus purpuratus XP_782627.2 N 0.718
XP_787384.2 Strongylocentrotus purpuratus XP_787384.2 N 0.718