CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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AFUA_5G10830
(
Aspergillus fumigatus
)
S1
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00575 (S1)
IPR003029
CADAFUAG00006235
T60186_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CADAFUAP00006235
S1
259
333
PILYKIYDGRVTGVKDFGAFVNLLGVKGKVDGLVHVSAMQEGARVNHPSDLVSRGQPVKVKVISIQGSRIGLSMK
Links
Other
S1
family RBPs
Other
Aspergillus fumigatus
RBPs
39 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ACLA_013700
Aspergillus clavatus
CADACLAG00000914
N
0.960
AFLA_119410
Aspergillus flavus
CADAFLAG00012513
N
0.960
An14g03770
Aspergillus niger
CADANGAG00011313
N
0.933
ANIA_04721
Aspergillus nidulans
CADANIAG00005708
N
0.920
AO090010000458
Aspergillus oryzae
CADAORAG00004519
N
0.960
ARB_03894
Arthroderma benhamiae
ARB_03894
N
0.880
ATEG_07640
Aspergillus terreus
CADATEAG00000474
N
0.947
BC1G_13853
Botrytis cinerea
BC1G_13853
N
0.800
BDBG_08912
Blastomyces dermatitidis
BDBG_08912
N
0.867
CIMG_00743
Coccidioides immitis
CIMG_00743
N
0.868
CPSG_07949
Coccidioides posadasii
CPSG_07949
N
0.895
EAT83861.1
Phaeosphaeria nodorum
EAT83861.1
N
0.733
estExt_fgenesh1_pg.C_20624
Cochliobolus heterostrophus C5
estExt_fgenesh1_pg.C_20624
N
0.747
estExt_fgenesh1_pg.C_30380
Cryphonectria parasitica
estExt_fgenesh1_pg.C_30380
N
0.776
estExt_fgenesh1_pg.C_40021
Neurospora tetrasperma
estExt_fgenesh1_pg.C_40021
N
0.760
estExt_fgenesh2_pg.C_30399
Neurospora discreta
estExt_fgenesh2_pg.C_30399
N
0.760
fgenesh1_pg.C_chr_9000466
Mycosphaerella graminicola
fgenesh1_pg.C_chr_9000466
N
0.747
GSTUMT00003070001
Tuber melanosporum
GSTUMT00003070001
N
0.707
gw1.1.76.1
Myceliophthora thermophila
gw1.1.76.1
N
0.750
HCAG_00961
Histoplasma capsulatum
HCAG_00961
N
0.893
MGG_08807
Magnaporthe oryzae
MGG_08807
N
0.787
MGYG_03171
Microsporum gypseum
MGYG_03171
N
0.867
NCU06318
Neurospora crassa
NCU06318
N
0.773
NFIA_076400
Neosartorya fischeri
CADNFIAG00008573
N
0.987
PABG_04784
Paracoccidioides brasiliensis
PABG_04784
N
0.880
Pa_6_9920
Podospora anserina
Pa_6_9920
N
0.724
Pc21g10420
Penicillium chrysogenum
Pc21g10420
N
0.867
PGTG_09681
Puccinia graminis
PGTG_09681
N
0.707
PMAA_073440
Penicillium marneffei
PMAA_073440
N
0.867
PTRG_08962
Pyrenophora tritici repentis
PTRG_08962
N
0.720
PTTG_03386
Puccinia triticina
PTTG_03386
N
0.707
SNOG_08693
Stagonospora nodorum
SNOG_08693
N
0.733
SS1G_13866
Sclerotinia sclerotiorum
SS1G_13866
N
0.829
TEQG_01284
Trichophyton equinum
TEQG_01284
N
0.773
TERG_04997
Trichophyton rubrum
TERG_04997
N
0.867
TESG_05437
Trichophyton tonsurans
TESG_05437
N
0.880
TRV_06617
Trichophyton verrucosum
TRV_06617
N
0.880
UREG_00720
Uncinocarpus reesii
UREG_00720
N
0.868
VDAG_07985
Verticillium dahliae
VDAG_07985
N
0.724