CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ZCCHC17
(
Echinops telfairi
)
S1
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00575 (S1)
IPR003029
ENSETEG00000007421
T60350_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSETEP00000006020
S1
13
86
PALYTIFQGEVAMVTDYGAFIKIPGCRKQGLVHRTHMSSCRVDKPSEIVDVGDKVWVKLIGREMKNDRIKVSLS
Links
Other
S1
family RBPs
Other
Echinops telfairi
RBPs
36 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CU693494.1
Danio rerio
ENSDARG00000076995
N
0.000
ENSGACG00000002544
Gasterosteus aculeatus
ENSGACG00000002544
N
0.000
ENSMGAG00000007903
Meleagris gallopavo
ENSMGAG00000007903
N
0.000
ENSORLG00000007392
Oryzias latipes
ENSORLG00000007392
N
0.000
ENSTNIG00000008521
Tetraodon nigroviridis
ENSTNIG00000008521
N
0.000
ENSTRUG00000006949
Takifugu rubripes
ENSTRUG00000006949
N
0.000
ENSTRUG00000011046
Takifugu rubripes
ENSTRUG00000011046
N
0.000
LOC100065232
Equus caballus
ENSECAG00000001400
N
0.000
LOC100392136
Callithrix jacchus
ENSCJAG00000021452
N
0.000
SHARPIN
Homo sapiens
ENSG00000179526
N
0.000
SHARPIN
Bos taurus
ENSBTAG00000012235
N
0.000
SHARPIN
Sus scrofa
ENSSSCG00000005914
N
0.000
Sharpin
Rattus norvegicus
ENSRNOG00000012812
N
0.000
SHARPIN
Cavia porcellus
ENSCPOG00000013242
N
0.000
Sharpin
Mus musculus
ENSMUSG00000022552
N
0.000
SHARPIN
Monodelphis domestica
ENSMODG00000010491
N
0.000
SHARPIN
Macaca mulatta
ENSMMUG00000007152
N
0.000
SHARPIN
Gorilla gorilla
ENSGGOG00000027471
N
0.000
SHARPIN
Gallus gallus
ENSGALG00000022341
N
0.000
SHARPIN
Anolis carolinensis
ENSACAG00000007245
N
0.000