CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSORLG00000007392
(
Oryzias latipes
)
RanBP ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00641 (zf-RanBP)
IPR001876
ENSORLG00000007392
T26689_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSORLP00000009263
RanBP ZF
288
315
QGWSCPSCTYINKPTRPGCEICSTNRPE
Links
Other
RanBP ZF
family RBPs
Other
Oryzias latipes
RBPs
24 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ENSTRUG00000006949
Takifugu rubripes
ENSTRUG00000006949
N
0.966
ENSGACG00000002544
Gasterosteus aculeatus
ENSGACG00000002544
N
0.929
ENSMGAG00000007903
Meleagris gallopavo
ENSMGAG00000007903
N
0.786
CU693494.1
Danio rerio
ENSDARG00000076995
N
0.786
SHARPIN
Gallus gallus
ENSGALG00000022341
N
0.786
RBCK1
Canis familiaris
ENSCAFG00000006921
N
0.750
ENSGACG00000017834
Gasterosteus aculeatus
ENSGACG00000017834
N
0.750
rbck1
Danio rerio
ENSDARG00000031954
N
0.750
SHARPIN
Anolis carolinensis
ENSACAG00000007245
N
0.750
SHARPIN
Sus scrofa
ENSSSCG00000005914
N
0.750
LOC100065232
Equus caballus
ENSECAG00000001400
N
0.750
SHARPIN
Monodelphis domestica
ENSMODG00000010491
N
0.750
Sharpin
Mus musculus
ENSMUSG00000022552
N
0.714
SHARPIN
Gorilla gorilla
ENSGGOG00000027471
N
0.714
SHARPIN
Homo sapiens
ENSG00000179526
N
0.714
RBCK1
Cavia porcellus
ENSCPOG00000005720
N
0.714
ENSTRUG00000011046
Takifugu rubripes
ENSTRUG00000011046
N
0.714
ENSTNIG00000008521
Tetraodon nigroviridis
ENSTNIG00000008521
N
0.714
Sharpin
Rattus norvegicus
ENSRNOG00000012812
N
0.714
e_gw1.9.12.1
Lottia gigantea
e_gw1.9.12.1
N
0.714
SHARPIN
Bos taurus
ENSBTAG00000012235
N
0.714
ENSORLG00000017281
Oryzias latipes
ENSORLG00000017281
N
0.714
LOC100392136
Callithrix jacchus
ENSCJAG00000021452
N
0.714
SHARPIN
Cavia porcellus
ENSCPOG00000013242
N
0.714