CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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SHARPIN
(
Monodelphis domestica
)
RanBP ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00641 (zf-RanBP)
IPR001876
ENSMODG00000010491
T26610_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMODP00000013144
RanBP ZF
299
325
GWSCPSCTFINVPGRPGCEMCSTERPA
ENSMODP00000013146
RanBP ZF
341
367
GWSCPSCTFINVPGRPGCEMCSTERPA
Links
Other
RanBP ZF
family RBPs
Other
Monodelphis domestica
RBPs
45 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
LOC100065232
Equus caballus
ENSECAG00000001400
N
0.852
SHARPIN
Sus scrofa
ENSSSCG00000005914
N
0.852
SHARPIN
Anolis carolinensis
ENSACAG00000007245
N
0.815
SHARPIN
Cavia porcellus
ENSCPOG00000013242
N
0.815
ENSMGAG00000007903
Meleagris gallopavo
ENSMGAG00000007903
N
0.815
Sharpin
Rattus norvegicus
ENSRNOG00000012812
N
0.815
LOC100392136
Callithrix jacchus
ENSCJAG00000021452
N
0.815
SHARPIN
Bos taurus
ENSBTAG00000012235
N
0.815
Sharpin
Mus musculus
ENSMUSG00000022552
N
0.815
SHARPIN
Homo sapiens
ENSG00000179526
N
0.786
SHARPIN
Gallus gallus
ENSGALG00000022341
N
0.786
SHARPIN
Gorilla gorilla
ENSGGOG00000027471
N
0.786
ENSTRUG00000006949
Takifugu rubripes
ENSTRUG00000006949
N
0.778
ENSGACG00000002544
Gasterosteus aculeatus
ENSGACG00000002544
N
0.778
SHARPIN
Macaca mulatta
ENSMMUG00000007152
N
0.750
ENSORLG00000007392
Oryzias latipes
ENSORLG00000007392
N
0.750
CU693494.1
Danio rerio
ENSDARG00000076995
N
0.741
RBCK1
Canis familiaris
ENSCAFG00000006921
N
0.741
RBCK1
Tupaia belangeri
ENSTBEG00000013740
N
0.704
ENSGACG00000017834
Gasterosteus aculeatus
ENSGACG00000017834
N
0.704
RBCK1
Macaca mulatta
ENSMMUG00000012601
N
0.704
ENSTNIG00000008521
Tetraodon nigroviridis
ENSTNIG00000008521
N
0.704
RBCK1
Homo sapiens
ENSG00000125826
N
0.704
RBCK1
Spermophilus tridecemlineatus
ENSSTOG00000008625
N
0.704
RBCK1
Gorilla gorilla
ENSGGOG00000008982
N
0.704
RBCK1
Pan troglodytes
ENSPTRG00000013144
N
0.704
RBCK1
Microcebus murinus
ENSMICG00000013495
N
0.704
RBCK1
Loxodonta africana
ENSLAFG00000027558
N
0.704
ENSPPYG00000010868
Pongo pygmaeus
ENSPPYG00000010868
N
0.704
RBCK1
Felis catus
ENSFCAG00000003278
N
0.704
Rbck1
Rattus norvegicus
ENSRNOG00000006695
N
0.704
Rbck1
Mus musculus
ENSMUSG00000027466
N
0.704
RBCK1
Procavia capensis
ENSPCAG00000001109
N
0.704
ENSORLG00000017281
Oryzias latipes
ENSORLG00000017281
N
0.704
Ame_R013963
Ailuropoda melanoleuca
Ame_R013963
N
0.704
RBCK1
Vicugna pacos
ENSVPAG00000000451
N
0.704
RBCK1
Tursiops truncatus
ENSTTRG00000005104
N
0.704
Q1JPC8_BOVIN
Bos taurus
ENSBTAG00000017002
N
0.704
A6ML91_CALJA
Callithrix jacchus
ENSCJAG00000020846
N
0.704
ENSTRUG00000011046
Takifugu rubripes
ENSTRUG00000011046
N
0.704
RBCK1
Oryctolagus cuniculus
ENSOCUG00000007636
N
0.704
RBCK1
Cavia porcellus
ENSCPOG00000005720
N
0.704
RBCK1
Pteropus vampyrus
ENSPVAG00000011249
N
0.704
RBCK1
Erinaceus europaeus
ENSEEUG00000013802
N
0.704