CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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SHARPIN
(
Sus scrofa
)
RanBP ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00641 (zf-RanBP)
IPR001876
ENSSSCG00000005914
T26789_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSSCP00000006323
RanBP ZF
338
363
GWSCPSCTFINAPSRPGCEMCSTQRP
Links
Other
RanBP ZF
family RBPs
Other
Sus scrofa
RBPs
44 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
LOC100065232
Equus caballus
ENSECAG00000001400
N
1.000
LOC100392136
Callithrix jacchus
ENSCJAG00000021452
N
0.962
SHARPIN
Bos taurus
ENSBTAG00000012235
N
0.962
Sharpin
Mus musculus
ENSMUSG00000022552
N
0.923
Sharpin
Rattus norvegicus
ENSRNOG00000012812
N
0.923
SHARPIN
Cavia porcellus
ENSCPOG00000013242
N
0.923
SHARPIN
Macaca mulatta
ENSMMUG00000007152
N
0.889
SHARPIN
Gorilla gorilla
ENSGGOG00000027471
N
0.889
SHARPIN
Homo sapiens
ENSG00000179526
N
0.889
SHARPIN
Monodelphis domestica
ENSMODG00000010491
N
0.852
ENSMGAG00000007903
Meleagris gallopavo
ENSMGAG00000007903
N
0.846
ENSTRUG00000006949
Takifugu rubripes
ENSTRUG00000006949
N
0.808
SHARPIN
Gallus gallus
ENSGALG00000022341
N
0.786
SHARPIN
Anolis carolinensis
ENSACAG00000007245
N
0.778
ENSGACG00000002544
Gasterosteus aculeatus
ENSGACG00000002544
N
0.778
CU693494.1
Danio rerio
ENSDARG00000076995
N
0.769
ENSTNIG00000008521
Tetraodon nigroviridis
ENSTNIG00000008521
N
0.769
ENSORLG00000007392
Oryzias latipes
ENSORLG00000007392
N
0.750
ENSGACG00000017834
Gasterosteus aculeatus
ENSGACG00000017834
N
0.741
ENSORLG00000017281
Oryzias latipes
ENSORLG00000017281
N
0.741
ENSTRUG00000011046
Takifugu rubripes
ENSTRUG00000011046
N
0.741
RBCK1
Canis familiaris
ENSCAFG00000006921
N
0.741
Q1JPC8_BOVIN
Bos taurus
ENSBTAG00000017002
N
0.731
RBCK1
Oryctolagus cuniculus
ENSOCUG00000007636
N
0.731
Rbck1
Mus musculus
ENSMUSG00000027466
N
0.731
RBCK1
Procavia capensis
ENSPCAG00000001109
N
0.731
ENSPPYG00000010868
Pongo pygmaeus
ENSPPYG00000010868
N
0.731
RBCK1
Tupaia belangeri
ENSTBEG00000013740
N
0.731
Rbck1
Rattus norvegicus
ENSRNOG00000006695
N
0.731
RBCK1
Pteropus vampyrus
ENSPVAG00000011249
N
0.731
RBCK1
Pan troglodytes
ENSPTRG00000013144
N
0.731
A6ML91_CALJA
Callithrix jacchus
ENSCJAG00000020846
N
0.731
Ame_R013963
Ailuropoda melanoleuca
Ame_R013963
N
0.731
RBCK1
Gorilla gorilla
ENSGGOG00000008982
N
0.731
RBCK1
Erinaceus europaeus
ENSEEUG00000013802
N
0.731
RBCK1
Felis catus
ENSFCAG00000003278
N
0.731
RBCK1
Homo sapiens
ENSG00000125826
N
0.731
RBCK1
Tursiops truncatus
ENSTTRG00000005104
N
0.731
RBCK1
Loxodonta africana
ENSLAFG00000027558
N
0.731
RBCK1
Macaca mulatta
ENSMMUG00000012601
N
0.731
RBCK1
Spermophilus tridecemlineatus
ENSSTOG00000008625
N
0.731
RBCK1
Microcebus murinus
ENSMICG00000013495
N
0.731
RBCK1
Vicugna pacos
ENSVPAG00000000451
N
0.731
RBCK1
Cavia porcellus
ENSCPOG00000005720
N
0.704